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Hi Bhushan,you could start with this:See also the referenced papers, esp the review by Opdam et al.Regards,Ronan
On 16 May 2018 at 18:56, Bhushan Dhamale <bhushan....@gmail.com> wrote:
I am looking for a good guide/tutorial source for the integration of RNA-seq data into genome-scale metabolic models.
I have the raw read FASTQ files for Mycobacterium tuberculosis. Despite several searches, I was unable to find a way to integrate data from the FASTQ files into the model.
I am quite new to this, and I would really appreciate some links to any sources that would demonstrate ways to do what I am aiming for.
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Hi Bhushan,This can be helpful too:Advances in the integration of transcriptional regulatory information into genome-scale metabolic modelsMethods for integration of transcriptomic data in genome-scale metabolic modelsHope it helps,Regards,
2018-05-16 13:26 GMT-05:00 Ronan M.T. Fleming <ronan.mt...@gmail.com>:
Hi Bhushan,you could start with this:See also the referenced papers, esp the review by Opdam et al.Regards,Ronan
On 16 May 2018 at 18:56, Bhushan Dhamale <bhushan....@gmail.com> wrote:
I am looking for a good guide/tutorial source for the integration of RNA-seq data into genome-scale metabolic models.
I have the raw read FASTQ files for Mycobacterium tuberculosis. Despite several searches, I was unable to find a way to integrate data from the FASTQ files into the model.
I am quite new to this, and I would really appreciate some links to any sources that would demonstrate ways to do what I am aiming for.
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Mr. Ronan MT Fleming B.V.M.S. Dip. Math. Ph.D.
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