Problem with pandas/tabulate

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Arturo Marin

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Feb 1, 2017, 6:13:24 AM2/1/17
to cobra pie

Hello everyone,

I am following the manual of COBRApy. I have encountered a problem in "4. Simulating with FBA". When I try "Analizing FBA solutions":

>>> model.summary()
cobra/core/Model.py:384 UserWarning: Summary methods require pandas/tabulate

My pandas is "0.17.1":

arturo@arturo-HP:~$ python
Python 2.7.12 (default, Nov 19 2016, 06:48:10)
[GCC 5.4.0 20160609] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import pandas as pd
>>> pd.__version__
'0.17.1'


Any suggestions?


thanks


Arturo Marin

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Feb 3, 2017, 5:47:18 AM2/3/17
to cobra pie
I fixed it installing "tabulate":

sudo pip install tabulate
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