Hello,
I am pretty new to cobrapy. My problem is as follows: I ran these specific commands,
from cobra.flux_analysis import flux_variability_analysis
model.summary(fva=0.9)
When I am using cobrapy in a Linux environment, those commands do not generate any error. But when I'm using cobrapy through Spyder-Anaconda in windows, it shows the following error. Please help me resolve this issue.
File ~\anaconda3\lib\site-packages\cobra\core\model.py:1209 in summary
return ModelSummary(model=self, solution=solution, fva=fva)
File ~\anaconda3\lib\site-packages\cobra\summary\model_summary.py:85 in __init__
self._generate(model, solution, fva)
File ~\anaconda3\lib\site-packages\cobra\summary\model_summary.py:120 in _generate
fva = flux_variability_analysis(
File ~\anaconda3\lib\site-packages\cobra\flux_analysis\variability.py:239 in flux_variability_analysis
with ProcessPool(
File ~\anaconda3\lib\site-packages\cobra\util\process_pool.py:56 in __init__
pickle.dump((initializer,) + initargs, handle)
TypeError: cannot pickle 'SwigPyObject' object
Version details:
conda version: 4.12.0
conda-build version: 3.21.8
python version: 3.9.12.final.0
Thanks,
Rakesh