Unable to Install Cloud bioLinux in local

[Venkatesh Duvvuri]

Hi,

I am trying to install cloud biolinux on my local Ubuntu 13.10 system with the code from https://github.com/chapmanb/cloudbiolinux.

During the installation process it asks for Login password of root(highlighted in red in the console shown below), I tried with my system's root password but it did not work.
Can some one suggest which password am I supposed to enter here.

Console output(Highlighted in red is the issue):

[localhost] local: rm -rf /home/venkatesh/tmp/cloudbiolinux
[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy  bash -c "wget --output-document=/etc/init.d/proftpdhttps://bitbucket.org/afgane/mi-deployment/raw/tip/conf_files/proftpd.initd"
--2014-03-26 19:43:39--  https://bitbucket.org/afgane/mi-deployment/raw/tip/conf_files/proftpd.initd
Resolving bitbucket.org (bitbucket.org)... 131.103.20.168, 131.103.20.167
Connecting to bitbucket.org (bitbucket.org)|131.103.20.168|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 5221 (5.1K) [text/plain]
Saving to: ‘/etc/init.d/proftpd’

100%[======================================>] 5,221       --.-K/s   in 0s      

2014-03-26 19:43:41 (1.28 GB/s) - ‘/etc/init.d/proftpd’ saved [5221/5221]

[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy  bash -c "sed -i.bak -r -e 's/REPLACE_THIS_WITH_CUSTOM_INSTALL_DIR/\/usr\/local\/proftpd/g' \"$(echo /etc/init.d/proftpd)\""
[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy  bash -c "chmod 755 /etc/init.d/proftpd"
[localhost] local: id -u galaxy
1001
[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy  bash -c "mv /tmp/proftpd.conf /usr/local/proftpd/etc/proftpd.conf"
[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy  bash -c "chmod 0755 /usr/local/proftpd/etc/proftpd.conf"
[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy  bash -c "wget --output-document=/usr/local/proftpd/etc/welcome_msg.txt https://bitbucket.org/afgane/mi-deployment/raw/tip/conf_files/welcome_msg.txt"
--2014-03-26 19:43:41--  https://bitbucket.org/afgane/mi-deployment/raw/tip/conf_files/welcome_msg.txt
Resolving bitbucket.org (bitbucket.org)... 131.103.20.168, 131.103.20.167
Connecting to bitbucket.org (bitbucket.org)|131.103.20.168|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 481 [text/plain]
Saving to: ‘/usr/local/proftpd/etc/welcome_msg.txt’

100%[======================================>] 481         --.-K/s   in 0s      

2014-03-26 19:43:43 (136 MB/s) - ‘/usr/local/proftpd/etc/welcome_msg.txt’ saved [481/481]

[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy  bash -c "cd /usr/local; stow proftpd"
DBG [cloudman.py]: ----- ProFTPd 1.3.4c installed to /usr/local/proftpd -----
[localhost] Login password for 'root':

[Brad Chapman]

Venkatesh;
Thanks for using CloudBioLinux and the problem report. Apologies, part
of the Cloudman install, specifically the SGE section, was not correctly
handling local install. I pushed a fix for this and also disabled
the Cloudman build section by default since that's normally not desired
for doing local CloudBioLinux builds.

Hopefully both of those fixes will get you a clean CloudBioLinux
install. Please let us know if you run into any other problems,
Brad

> Hi,
>
> I am trying to install cloud biolinux on my local Ubuntu 13.10 system with
> the code from https://github.com/chapmanb/cloudbiolinux.
>
> During the installation process it asks for Login password of
> root(highlighted in red in the console shown below), I tried with my
> system's root password but it did not work.
> Can some one suggest which password am I supposed to enter here.
>

> *Console output(*Highlighted in red is the issue*):*

> *[localhost] local: sudo http_proxy=$http_proxy https_proxy=$https_proxy

> bash -c "cd /usr/local; stow proftpd"DBG [cloudman.py]: ----- ProFTPd
> 1.3.4c installed to /usr/local/proftpd -----[localhost] Login password for

> 'root':*
>
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