Error Compiling

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Alexander Damyanov

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May 11, 2016, 6:25:11 AM5/11/16
to cloog-de...@googlegroups.com
Dear Dev Team,


I am using arch and receive the following error while I am trying to
update the package. Here is the log from compiling phase. Probably it
was useful for you

--

==> Building and installing package
==> Making package: cloog 0.18.4-1 (ср май 11 13:20:53 EEST 2016)
==> Checking runtime dependencies...
==> Checking buildtime dependencies...
==> Retrieving sources...
-> Downloading cloog-0.18.4.tar.gz...
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 4684k 100 4684k 0 0 4309k 0 0:00:01 0:00:01 --:--:--
4313k
==> Validating source files with md5sums...
cloog-0.18.4.tar.gz ... Passed
==> Extracting sources...
-> Extracting cloog-0.18.4.tar.gz with bsdtar
==> Starting build()...
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports nested variables... (cached) yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for cd... no
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-unknown-linux-gnu file names to
x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain
format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports
shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for texi2dvi... texi2dvi
checking for C compiler vendor... gnu
checking CFLAGS_WARN for maximum warnings... -Wall
checking for an ANSI C-conforming const... yes
checking for size_t... yes
checking for ANSI C header files... (cached) yes
checking for strtol... yes
checking for getrusage... yes
checking which isl to use... system
checking which gmp to use... system
checking gmp.h usability... yes
checking gmp.h presence... yes
checking for gmp.h... yes
checking for __gmpz_init in -lgmp... yes
checking whether mp_get_memory_functions is declared... yes
checking which osl to use... no
checking our pkgconfig libname... cloog-isl
checking our pkgconfig version... 0.18.4
checking our pkgconfig_libdir... ${libdir}/pkgconfig
expanded our pkgconfig_libdir... /usr/lib/pkgconfig
checking our pkgconfig_libfile... cloog-isl.pc
checking our package / suffix... cloog-isl /
checking our pkgconfig description... cloog-isl Library
checking our pkgconfig requires...
checking our pkgconfig ext libs... -lcloog-isl -lgmp
checking our pkgconfig cppflags... -D_FORTIFY_SOURCE=2 -DCLOOG_INT_GMP=1
checking our pkgconfig ldflags... -L/lib
-Wl,-O1,--sort-common,--as-needed,-z,relro
noninstalled pkgconfig -L
/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/.libs
noninstalled pkgconfig -I
/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/./include
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating test/Makefile
config.status: creating autoconf/Doxyfile
config.status: creating doc/Makefile
config.status: creating source/version.c
config.status: creating include/cloog/version.h
config.status: creating genversion.sh
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing cloog-isl.pc commands
config.status: creating cloog-isl.pc.in
config.status: creating cloog-isl.pc
config.status: creating cloog-isl-uninstalled.pc
config.status: creating cloog-isl-uninstalled.sh
config.status: executing version.h commands
config.status: executing doc/gitversion.texi commands
/*-----------------------------------------------*
* CLooG configuration is OK *
*-----------------------------------------------*/
It appears that your system is OK to start CLooG compilation. You need
now to type "make". After compilation, you should check CLooG by typing
"make check". If no problem occur, you can type "make uninstall" if
you are upgrading an old version. Lastly type "make install" to install
CLooG on your system (log as root if necessary).
Making all in .
make[1]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
CC source/libcloog_isl_la-block.lo
CC source/libcloog_isl_la-clast.lo
CC source/libcloog_isl_la-matrix.lo
CC source/libcloog_isl_la-state.lo
CC source/libcloog_isl_la-input.lo
CC source/libcloog_isl_la-int.lo
CC source/libcloog_isl_la-loop.lo
CC source/libcloog_isl_la-names.lo
CC source/libcloog_isl_la-options.lo
CC source/libcloog_isl_la-pprint.lo
CC source/libcloog_isl_la-program.lo
CC source/libcloog_isl_la-statement.lo
CC source/libcloog_isl_la-stride.lo
CC source/libcloog_isl_la-union_domain.lo
CC source/libcloog_isl_la-util.lo
CC source/libcloog_isl_la-version.lo
CC source/isl/libcloog_isl_la-domain.lo
CC source/isl/libcloog_isl_la-constraints.lo
CC source/isl/libcloog_isl_la-backend.lo
CCLD libcloog-isl.la
ar: `u' modifier ignored since `D' is the default (see `U')
CC source/cloog.o
CCLD cloog
make[1]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
Making all in doc
make[1]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/doc'
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/doc'
Making all in test
make[1]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
CC generate_test.o
cd ..; make libcloog-isl.la
make[2]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
make[2]: 'libcloog-isl.la' is up to date.
make[2]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
CCLD generate_test
make[1]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
==> Starting check()...
Making check in .
make[1]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
make[1]: Nothing to be done for 'check-am'.
make[1]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
Making check in doc
make[1]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/doc'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/doc'
Making check in test
make[1]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
cd ..; make libcloog-isl.la
make[2]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
make[2]: 'libcloog-isl.la' is up to date.
make[2]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
make check_c.sh check_fortran.sh check_strided.sh check_openscop.sh
check_special.sh
make[2]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
make[2]: Nothing to be done for 'check_c.sh'.
make[2]: Nothing to be done for 'check_fortran.sh'.
make[2]: Nothing to be done for 'check_strided.sh'.
make[2]: Nothing to be done for 'check_openscop.sh'.
make[2]: Nothing to be done for 'check_special.sh'.
make[2]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
make check-TESTS
make[2]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
make[3]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
FAIL: check_c.sh
FAIL: check_fortran.sh
PASS: check_strided.sh
PASS: check_openscop.sh
FAIL: check_special.sh
make[4]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
cd ..; make libcloog-isl.la
make[5]: Entering directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
make[5]: 'libcloog-isl.la' is up to date.
make[5]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4'
make[4]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
============================================================================
Testsuite summary for cloog 0.18.4
============================================================================
# TOTAL: 5
# PASS: 2
# SKIP: 0
# XFAIL: 0
# FAIL: 3
# XPASS: 0
# ERROR: 0
============================================================================
See test/test-suite.log
Please report to cloog-de...@googlegroups.com
============================================================================
Makefile:940: recipe for target 'test-suite.log' failed
make[3]: *** [test-suite.log] Error 1
make[3]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
Makefile:1046: recipe for target 'check-TESTS' failed
make[2]: *** [check-TESTS] Error 2
make[2]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
Makefile:1147: recipe for target 'check-am' failed
make[1]: *** [check-am] Error 2
make[1]: Leaving directory
'/tmp/yaourt-tmp-snagles/aur-cloog/src/cloog-0.18.4/test'
Makefile:1046: recipe for target 'check-recursive' failed
make: *** [check-recursive] Error 1
==> ERROR: A failure occurred in check().
Aborting...
==> ERROR: Makepkg was unable to build cloog.
==> Restart building cloog ? [y/N]
==> ------------------------------
==>

--

If you need more information, please specify and I will try to collect
and provide back to you.


Best Regards,

Alex


----

Alexander Damyanov

unread,
May 11, 2016, 8:29:20 AM5/11/16
to Oleksandr Zinenko, cloog-de...@googlegroups.com
Dear Oleksandr,

It seams that the issue with compiling is based in the isl package
installed on my computer. It was 0.16-1. Actually the package which I
want to install comes from AUR this is the unofficial Arch repo where
the packages comes as source and you should compile and build native
arch package.
Anyway this is enough for me. I just report the case because of
advantage during build process just for some help for you and your team.

Best Regards,
Alex

On 11.05.2016 15:23, Oleksandr Zinenko wrote:
> Hello Alexander,
>
> we are not maintaining the package in the Arch distribution, so I am not sure we can fix it for you.
> However, please check the version of libisl installed in your system or used as dependence of ClooG.
> ClooG 0.18.4 is supposed to be used with isl-0.15. Tests may fail with a newer (or older) version of isl. In fact, due to the nature of the underlying model, multiple equivalently correct outputs are possible depending on the strategy isl takes, and the tests are only checking for one of them. We will release a better testing infrastructure with the next major release of ClooG. As for now, please consider contacting Arch maintainers and asking them to make CLooG depend on the appropriate version of the libisl or disabling these tests partially.
>
> Oleksandr Zinenko
> Inria / LRI / Université Paris-Sud
>> --
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----

Cédric Bastoul

unread,
May 11, 2016, 9:44:49 AM5/11/16
to Alexander Damyanov, Oleksandr Zinenko, CLooG Development
Hi @all,
thanks for reporting, the solution to the problem has been submitted as a pull request, a new version of CLooG should be released soon (note that the problem is in the checking mechanism and is due to the version of isl, CLooG itself is OK, you can use it). Best regards,

Cedric
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