pet-surface

[Remi Silva]

Hi, 

I am trying to use the pet-surface pipeline to process amyloid-pet images, however, I am unsure on how to get the PET tsv file.

I am using ADNI dataset and I'm not sure if the file is something that is present in the downloaded CSV file or something I am supposed to generate.

Many thanks, 

Renata

[Alice Joubert]

Hello Renata,

That .tsv file is supposed to be generated by the user based on the .json files associated to each PET image in your BIDS dataset, where you should find the values for psf_x, psf_y and psf_z.

Hope this helps !

Best,

Alice