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CLARK Users

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Welcome to the Google Group dedicated for the CLARK users!
You will find news, and other posts related to the tool.

Any questions or a problem to share?

Please read out previous post/conversations, over the past years many users have contributed with important and interesting posts. If you see a similar issue was reported in the past weeks/months then use it to continue the conversation, otherwise feel free to submit a post.

Github page: rouni001/CLARK (github.com), Webpage of CLARK: http://clark.cs.ucr.edu

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Sanjeev Sariya, Rachid5

5/15/17

Making sense of classification output from clark

I think I got scientific names with command: bash estimate_abundance.sh -F result.csv -D db_dir >

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Making sense of classification output from clark

I think I got scientific names with command: bash estimate_abundance.sh -F result.csv -D db_dir >

5/15/17

1/27/17

Calculate abundances for Custom databases

Hello Jens, You can do this by not using the option "-D" when you call "

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classify_metagenome

Calculate abundances for Custom databases

Hello Jens, You can do this by not using the option "-D" when you call "

1/27/17

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