makeSummaryTables.sh not yielding proper results

[Lolo Aboufoul]

Hello! My name is Lolo Aboufoul, and I'm a current graduate student at the University of North Carolina at Charlotte. I am working on a bioinformatics project in which my colleague and I are analyzing samples of wastewater and negative COVID-19 PCR tests. 

We have completed the initial analysis of the sequencing results using CLARK and now want to make a summary table with those initial findings. However, whenever I try to run the makeSummaryTables.sh script I keep getting an error saying the input file is not a results file generated by Clark. Would you be able to assist me with this?

Thank you so much! I appreciate it your help. 

[Rachid]

Hi Lolo!

Great news: It seems you got it working, given your next post!

Thank you,

Rachid