Filtering out paired Illumina reads (FASTAQ) based on Clark results

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Apr 19, 2017, 9:15:14 AM4/19/17

to CLARK Users

Dear Clark users,

Does anyone has a script to filter out reads in FASTAQ format using results produced by Clark?

For example, I would like to filter out paired-end reads identified as Bacteria and then use the remaining reads for downstream genome assembly.

Thank you so much!

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Sep 17, 2018, 10:25:21 PM9/17/18

to CLARK Users

Im am wondering also about this Mozart, have you got any response about this?

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