Hi, if someone could help with some debugging to generate a Circos plot. This would be greatly appreciated right now.
debuggroup summary 0.32s welcome to circos v0.68-pre1 7 Apr 2015 on Perl 5.010000
debuggroup summary 0.32s current working directory /home/martink/www/htdocs/tableviewer/tmp/imjpyse
debuggroup summary 0.32s command /home/martink/work/circos/svn-tags/circos-tableviewer//bin/circos -param random_string=imjpyse -conf /home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc/circos.conf
debuggroup summary 0.32s guessing configuration file
debuggroup summary 0.32s found conf file /home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc/circos.conf
*** CIRCOS ERROR ***
cwd: /home/martink/www/htdocs/tableviewer/tmp/imjpyse
command: /home/martink/work/circos/svn-tags/circos-tableviewer//bin/circos
-param random_string=imjpyse -conf
/home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc/circos.conf
CONFIGURATION FILE ERROR
Error parsing the configuration file. You used an <<include FILE>> directive,
but the FILE could not be found. This FILE is interpreted relative to the
configuration file in which the <<include>> directive is used. Circos lookd
for the file in these directories
/home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc
/home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc
/home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc/etc
/home/martink/work/circos/svn-tags/circos-0.68-pre1/bin/etc
/home/martink/work/circos/svn-tags/circos-0.68-pre1/bin/../etc
/home/martink/work/circos/svn-tags/circos-0.68-pre1/bin/..
/home/martink/work/circos/svn-tags/circos-0.68-pre1/bin
The Config::General module reported the error
Config::General The file "data/colors.conf" does not exist within ConfigPath:
/home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc./home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc./home/martink/www/htdocs/tableviewer/tmp/imjpyse/etc/etc./home/martink/work/circos/svn-tags/circos-0.68-pre1/bin/etc./home/martink/work/circos/svn-tags/circos-0.68-pre1/bin/../etc./home/martink/work/circos/svn-tags/circos-0.68-pre1/bin/.../home/martink/work/circos/svn-tags/circos-0.68-pre1/bin!
at
/home/martink/work/circos/svn-tags/circos-0.68-pre1/bin/../lib/Circos/Configuration.pm
line 819.
Here is a picture snapshot
of all my data files attached!