Help with number of rows and columns

[MARIA GABRIELA VIEIRA OLIVEIRA DA SILVA]

Hello! I'm from Brazil (UFPE) and I need help with settings of circos table viewer. My research is with proteomic analysis and I have more than 100 proteins to put in the circos plot. 

Could you give me the acess code to remove this restrictions, please?? 

I need to do the circos plot with more than 50 rows.

[Martin]

I've emailed you.

[Daniel Sonenshine]

I have the same problem with more than 200 proteins. I found a code in biowulf but it put the protein names on the inside of the circle. There were way too many flags and other markers to.make any progress.

 If you get lucky and succeed please pass it on to me.

Daniel

--
You received this message because you are subscribed to the Google Groups "Circos" group.
To unsubscribe from this group and stop receiving emails from it, send an email to circos-data-visual...@googlegroups.com.
To view this discussion visit https://groups.google.com/d/msgid/circos-data-visualization/8c167ec4-cacd-4076-b058-3460bbe64888n%40googlegroups.com.

[Martin Krzywinski]

Figures based on tables with so many rows and columns are going to be very hard to decipher.

Some strategies:

- filter out small values from the table

- highlight top N values for each row/column

- highlight top M values across the figure

Martin Krzywinski

science + art

https://mk.bcgsc.ca

To view this discussion visit https://groups.google.com/d/msgid/circos-data-visualization/CAJfRqfr-vwRhjbhP%3DSRzGqn888Y9iLCtQAOgWWMqjTHqfoe85A%40mail.gmail.com.

[MARIA GABRIELA VIEIRA OLIVEIRA DA SILVA]

I'm not getting use the acess code, I think there is some problem with that.

The site accept only 20 words and this code access have 21.

Could you help me?? please.

Thank you very much!!!

[Martin]

Sorry about that - I forgot about this limitation.

I've emailed you.