Dose circos can change the line position？

24 views

Skip to first unread message

拾玖

unread,

Oct 21, 2023, 4:22:40 PM10/21/23

to Circos

Dose circos can change the line position？ like the two fig of the link line of QTL-C07, i just know output diagrams like first fig style, now i want the secend style, how can i achieve it?

Martin

unread,

Oct 21, 2023, 4:25:21 PM10/21/23

to Circos

Try

<plot>

...

link_orientation = out

</plot>

拾玖

unread,

Oct 22, 2023, 8:03:18 AM10/22/23

to Circos

Thanks, it works!

拾玖

unread,

Oct 23, 2023, 4:11:23 AM10/23/23

to Circos

Dear Martin

I put the " link_orientation = out" into my circos <plot> file, at first it did work. but after it update, i got a err when i re-run the circos; the err showed 'Set::IntSpan::_copy_run_list: Bad order 2: 0--22 at /mnt/d/circos-0.69-9/bin/../lib/Circos.pm line 2022.'