Dose circos can change the line position?

22 views
Skip to first unread message

拾玖

unread,
Oct 21, 2023, 4:22:40 PM10/21/23
to Circos
Dose circos can change the line position? like the two fig of the link line of QTL-C07,  i just know output diagrams like first fig style, now i want the secend style, how can i achieve it?
q1.pngq2.png

Martin

unread,
Oct 21, 2023, 4:25:21 PM10/21/23
to Circos

Try

<plot>
...
link_orientation = out
</plot>

拾玖

unread,
Oct 22, 2023, 8:03:18 AM10/22/23
to Circos
Thanks, it  works!

拾玖

unread,
Oct 23, 2023, 4:11:23 AM10/23/23
to Circos
Dear  Martin
    I put the " link_orientation = out" into my  circos <plot> file,  at first it did work. but after it update, i got a err when i re-run the circos; the err showed  'Set::IntSpan::_copy_run_list: Bad order 2: 0--22 at /mnt/d/circos-0.69-9/bin/../lib/Circos.pm line 2022.'
Thanks

Reply all
Reply to author
Forward
0 new messages