Dear Circos Community,
Thanks for all the helpful information you have been posting to help us beginners limp forward. It has been a great help in eliminating some of my errors, but I unforunatly come with yet another GD error.
I am running Ubuntu 14.04.2 LTS on a VM and have been having a huge issue with GD. So far, the best advice I have run is from http://kylase.github.io/CircosAPI/circos-on-linux-virtual-machine/, in which the errors have been minimized to:
*** REQUIRED MODULE IS MISSING ***
You are missing the Perl module GD::Polyline. Use CPAN to install it as described in this tutori...
'CPAN install
GD::Polyline' reports that this module is up to date (0.2).
However, trying to find it via locate GD::Polyline gives no information and trying: perl -MGD::Polyline -e 'print 1' , as suggested elsewhere, gives the classical “Can't located loadable object for module GD in @INC (@INC contains: …).
Perhaps I have it,
but I was unable to compile it using the multiple attempts at the GD
library as suggested in multiple locations. The good news is that I
ran run: 'gdlib-config –all' with relevant information being produced, so I believe I have the library/complier(?).
Lastly, trying to install GD via the .tar.gz at http://search.cpan.org/CPAN/authors/id/L/LD/LDS/GD-2.56.tar.gz is why I have been trying so many alternative approach, as trying this method results in a make error:
Test Summary Report
-------------------
t/GD.t (Wstat: 65280 Tests: 9 Failed: 9)
Failed tests: 1-9
Non-zero exit status: 255
Parse errors: Bad plan. You planned 11 tests but ran 9.
t/Polyline.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 1 tests but ran 0.
Files=2, Tests=9, 0 wallclock secs ( 0.03 usr 0.01 sys + 0.06 cusr 0.01 csys = 0.11 CPU)
Result: FAIL
Failed 2/2 test programs. 9/9 subtests failed.
make: ***
[test_dynamic] Error 2
Thanks in advance!
Ryan
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