MrBayea issue

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YU DENG

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Dec 3, 2024, 11:40:19 PM12/3/24
to CIPRES Science Gateway Users

Dear Professor,

I encountered an issue while running my MrBayes program. It seems to terminate abruptly during execution, with the STDERR output remaining empty. Additionally, the final lines of the STDOUT file do not indicate any error messages. Below is the last portion of the STDOUT file:

650b0f26-d3d7-4e9b-94ad-f1a669ea54bb.png

Could you please advise on how to resolve this issue?

Thank you for your response, and I hope you have a pleasant day!

Best regards.

Pfeiffer, Wayne

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Dec 4, 2024, 2:46:59 AM12/4/24
to YU DENG, CIPRES Science Gateway Users, Pfeiffer, Wayne
Hi,

Please send the handle of the job from the _JOBINFO.TXT file.

Thanks,
Wayne

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YU DENG

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Dec 4, 2024, 8:48:30 AM12/4/24
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Task\ label=PL-BI_2
Task\ ID=3168190
Tool=MRBAYES_XSEDE
created\ on=2024-12-03 02:34:09.0
JobHandle=NGBW-JOB-MRBAYES_XSEDE-6CB873C11E48481DA2AED3616D6B92E2
RunNumber=1
resource=popeye
User\ ID=171133
User\ Name=qindeng
email=20995...@qq.com
Output=(ALL_FILES,*,UNKNOWN,UNKNOWN,UNKNOWN)
ChargeFactor=1.000000
cores=12
JOBID=2022248
 
 I greatly appreciate your help and the trouble you took.
  

2024年12月4日水曜日 15:46:59 UTC+8 Wayne Pfeiffer:

Pfeiffer, Wayne

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Dec 4, 2024, 9:00:20 AM12/4/24
to YU DENG, CIPRES Science Gateway Users, Pfeiffer, Wayne
Hi,

I think that the node that your job was running on may have failed.

* Please resubmit the job, and see if it works the second time.

Thanks,
Wayne

Mark Miller

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Dec 4, 2024, 2:41:24 PM12/4/24
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It should be possible to continue this job, if significant time was lost.
Mark
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