IQTREE2 issue

[David Cannatella]

Mark et al.

I have used the CIPRES portal a lot, with few problems.

I have never used the IQTREE2 program on CIPRES, although I use it extensively on my laptop.

My IQTREE run fails with this error message (stderr.txt):

"Inactive Modules: 1) subversion/1.14.0 The following have been reloaded with a version change: 1) cpu/0.17.3b => cpu/0.15.4"

I googled this message but found nothing.

I ran the analysis using default settings. The screen output is below. Any idea what the problem is?

Thanks,

Dave

Sat Nov 16 09:06:02 PST 2024 > QUEUE : SUCCESS : NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761 : Added to run queue.
Sat Nov 16 09:06:10 PST 2024 > COMMANDRENDERING : SUCCESS : NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761 : Command rendered successfully: iqtree2_2.3.6_expanse -s infile.txt -st MORPH --sprrad 6 -safe --prefix output
Sat Nov 16 09:06:11 PST 2024 > INPUTSTAGING : SUCCESS : NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761 : Staging input files to: expanse
Sat Nov 16 09:06:11 PST 2024 > INPUTSTAGING : SUCCESS : NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761 : Input files staged successfully to: /expanse/projects/ngbt/backend/expanse_workspace/NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761/
Sat Nov 16 09:06:15 PST 2024 > SUBMITTED : SUCCESS : NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761 : Submitted to expanse as job '35158647'.
Sat Nov 16 09:07:32 PST 2024 > LOAD_RESULTS : SUCCESS : NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761 : Trying to transfer results.
Sat Nov 16 09:07:32 PST 2024 > COMPLETED : SUCCESS : NGBW-JOB-IQTREE_XSEDE-B77715A353534063A5E81BE264DE1761 : Output files retrieved. Task is finished.

[Pfeiffer, Wayne]

Hi Dave,

There is no problem. Your job finished successfully in 25 seconds as you can see from output.log or stdout.txt.

Your data set is very small with only 86 taxa and 152 characters, so the analysis is very fast.

Best regards,

Wayne

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