Problem with cgal-bindings install.
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Willie Maddox
Sep 4, 2013, 4:58:13 PM9/4/13
to cgal-bindi...@googlegroups.com
Hello,
Here is the error when running make:
[maddoxw@T3600-Ubuntu-Phys ~/src/cgal-bindings/build/CGAL-4.2_release]$ make
[ 40%] Built target CGAL_Kernel_cpp
[ 43%] Built target _CGAL_Kernel
[ 45%] Built target CGAL_Triangulation_3_cpp
[ 48%] Built target _CGAL_Triangulation_3
[ 50%] Built target CGAL_Triangulation_2_cpp
[ 53%] Built target _CGAL_Triangulation_2
[ 56%] Built target _CGAL_Polyhedron_3
[ 58%] Built target CGAL_Alpha_shape_2_cpp
[ 61%] Built target _CGAL_Alpha_shape_2
[ 65%] Built target _CGAL_Spatial_searching
[ 66%] Built target CGAL_AABB_tree_cpp
[ 70%] Built target _CGAL_AABB_tree
[ 71%] Built target CGAL_Surface_mesher_cpp
[ 75%] Built target _CGAL_Surface_mesher
[ 76%] Built target CGAL_Mesh_3_cpp
[ 80%] Built target _CGAL_Mesh_3
[ 83%] Built target _CGAL_Mesh_2
[ 86%] Built target _CGAL_Interpolation
[ 90%] Built target _CGAL_Convex_hull_2
[ 93%] Built target _CGAL_Voronoi_diagram_2
[ 96%] Built target _CGAL_HalfedgeDS
[ 98%] Building CXX object SWIG_CGAL/Point_set_processing_3/CMakeFiles/_CGAL_Point_set_processing_3.dir/CGAL_Point_set_processing_3PYTHON_wrap.cxx.o
In file included from /home/maddoxw/src/cgal-bindings/build/CGAL-4.2_release/SWIG_CGAL/Point_set_processing_3/CGAL_Point_set_processing_3PYTHON_wrap.cxx:3386:
/home/maddoxw/src/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:193: error: using ‘typename’ outside of template
make[2]: *** [SWIG_CGAL/Point_set_processing_3/CMakeFiles/_CGAL_Point_set_processing_3.dir/CGAL_Point_set_processing_3PYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Point_set_processing_3/CMakeFiles/_CGAL_Point_set_processing_3.dir/all] Error 2
make: *** [all] Error 2
also of help may be,
[maddoxw@T3600-Ubuntu-Phys ~/src/cgal-bindings/build/CGAL-4.2_release]$ gcc --version
gcc (Ubuntu/Linaro 4.4.7-2ubuntu1) 4.4.7
[maddoxw@T3600-Ubuntu-Phys ~/src/cgal-bindings/build/CGAL-4.2_release]$ swig -version
SWIG Version 2.0.7
Compiled with g++ [x86_64-unknown-linux-gnu]
Configured options: +pcre
Suggestions?
Thanks,
-Will
Sebastien Loriot (GeometryFactory)
Sep 6, 2013, 7:12:56 AM9/6/13
to cgal-bindi...@googlegroups.com
> make[2]: ***
> [SWIG_CGAL/Point_set_processing_3/CMakeFiles/_CGAL_Point_set_processing_3.dir/CGAL_Point_set_processing_3PYTHON_wrap.cxx.o]
> Error 1
> make[1]: ***
> [SWIG_CGAL/Point_set_processing_3/CMakeFiles/_CGAL_Point_set_processing_3.dir/all]
> Error 2
> make: *** [all] Error 2
>
> also of help may be,
>
> [maddoxw@T3600-Ubuntu-Phys ~/src/cgal-bindings/build/CGAL-4.2_release]$
> gcc --version
> gcc (Ubuntu/Linaro 4.4.7-2ubuntu1) 4.4.7
> [maddoxw@T3600-Ubuntu-Phys ~/src/cgal-bindings/build/CGAL-4.2_release]$
> swig -version
> SWIG Version 2.0.7
> Compiled with g++ [x86_64-unknown-linux-gnu]
> Configured options: +pcre
>
> Suggestions?
>
git pull :)
> [SWIG_CGAL/Point_set_processing_3/CMakeFiles/_CGAL_Point_set_processing_3.dir/CGAL_Point_set_processing_3PYTHON_wrap.cxx.o]
> Error 1
> make[1]: ***
> [SWIG_CGAL/Point_set_processing_3/CMakeFiles/_CGAL_Point_set_processing_3.dir/all]
> Error 2
> make: *** [all] Error 2
>
> also of help may be,
>
> [maddoxw@T3600-Ubuntu-Phys ~/src/cgal-bindings/build/CGAL-4.2_release]$
> gcc --version
> gcc (Ubuntu/Linaro 4.4.7-2ubuntu1) 4.4.7
> [maddoxw@T3600-Ubuntu-Phys ~/src/cgal-bindings/build/CGAL-4.2_release]$
> swig -version
> SWIG Version 2.0.7
> Compiled with g++ [x86_64-unknown-linux-gnu]
> Configured options: +pcre
>
> Suggestions?
>
Sebastien.
> Thanks,
>
> -Will
>
>
> --
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Willie Maddox
Sep 9, 2013, 7:18:50 PM9/9/13
to cgal-bindi...@googlegroups.com
Well, that was an easy fix. My make ran without a hitch. Thanks!!!
Yasaman shm
Jun 29, 2014, 2:35:11 AM6/29/14
to cgal-bindi...@googlegroups.com
Hi,
I'm trying to install CGAl-bindings too and have the same error. I just don't get how and where I can use the git pull?
Thank you
Yasaman
Sebastien Loriot (GeometryFactory)
Jul 3, 2014, 3:06:17 PM7/3/14
to cgal-bindi...@googlegroups.com
On 06/29/2014 08:35 AM, Yasaman shm wrote:
>
> Hi,
>
> I'm trying to install CGAl-bindings too and have the same error. I just
> don't get how and where I can use the git pull?
"git pull" means take the last version from git.
>
> Hi,
>
> I'm trying to install CGAl-bindings too and have the same error. I just
> don't get how and where I can use the git pull?
Could you tell me more about your system, what you tried and what is not
working?
Sebastien.
> --
> You received this message because you are subscribed to the Google
> Groups "CGAL Bindings discuss" group.
> To unsubscribe from this group and stop receiving emails from it, send
> an email to cgal-bindings-di...@googlegroups.com
> <mailto:cgal-bindings-di...@googlegroups.com>.
> You received this message because you are subscribed to the Google
> Groups "CGAL Bindings discuss" group.
> To unsubscribe from this group and stop receiving emails from it, send
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> For more options, visit https://groups.google.com/d/optout.
Yasaman shm
Jul 5, 2014, 7:27:51 PM7/5/14
to cgal-bindi...@googlegroups.com
Hi,
Yes, Thanks,
I'm using Ubuntu, and I used these codes:
I need to use the C++ codes on python.
Yes, Thanks,
I'm using Ubuntu, and I used these codes:
I need to use the C++ codes on python.
git clone https://code.google.com/p/cgal-bindings
cd cgal-bindings
mkdir build/CGAL-3.9_release -p
cd build/CGAL-3.9_release
cmake -DCGAL_DIR=/usr/lib/CGAL -DBUILD_PYTHON=ON -DBUILD_PYTHON=OFF -DPYTHON_OUTDIR_PREFIX=../../examples/python ../..
make -j 4
but for the last one I get this:
/usr/include/CGAL/Regular_triangulation_2.h:638:3: note: template argument deduction/substitution failed:
In file included from /home/yasi/cgal-bindings/SWIG_CGAL/Interpolation/typedefs.h:10:0,
from /home/yasi/cgal-bindings/build/CGAL-3.9_release/SWIG_CGAL/Interpolation/CGAL_InterpolationPYTHON_wrap.cxx:3274:
/usr/include/CGAL/natural_neighbor_coordinates_2.h:158:3: note: candidate expects 3 arguments, 4 provided
dt.get_boundary_of_conflicts(p, std::back_inserter(hole), fh, false);
^
make[2]: *** [SWIG_CGAL/Interpolation/CMakeFiles/_CGAL_Interpolation.dir/CGAL_InterpolationPYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Interpolation/CMakeFiles/_CGAL_Interpolation.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
virtual memory exhausted: Cannot allocate memory
make[2]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/all] Error 2
make: *** [all] Error 2
This is actually end of the messages, there is more.
I understand that git pull means get the last version but I'm not sure how I can use it here.
Thank you
Yasaman
> an email to cgal-bindings-discuss+unsub...@googlegroups.com
> <mailto:cgal-bindings-discuss+unsub...@googlegroups.com>.
Sebastien Loriot (GeometryFactory)
Jul 7, 2014, 1:48:02 AM7/7/14
to cgal-bindi...@googlegroups.com
On 07/06/2014 01:27 AM, Yasaman shm wrote:
> Hi,
>
> Hi,
>
> Yes, Thanks,
> I'm using Ubuntu, and I used these codes:
> I need to use the C++ codes on python.
>
> git clone https://code.google.com/p/cgal-bindings
> cd cgal-bindings
> mkdir build/CGAL-3.9_release-p
> cd build/CGAL-3.9_release
> cmake-DCGAL_DIR=/usr/lib/CGAL-DBUILD_PYTHON=ON-DBUILD_PYTHON=OFF -DPYTHON_OUTDIR_PREFIX=../../examples/python../..
> make-j4
What version of CGAL are you using?
> I'm using Ubuntu, and I used these codes:
> I need to use the C++ codes on python.
>
> git clone https://code.google.com/p/cgal-bindings
> cd cgal-bindings
> mkdir build/CGAL-3.9_release-p
> cd build/CGAL-3.9_release
> cmake-DCGAL_DIR=/usr/lib/CGAL-DBUILD_PYTHON=ON-DBUILD_PYTHON=OFF -DPYTHON_OUTDIR_PREFIX=../../examples/python../..
> make-j4
>
> but for the last one I get this:
>
> /usr/include/CGAL/Regular_triangulation_2.h:638:3: note: template argument deduction/substitution failed:
> In file included from /home/yasi/cgal-bindings/SWIG_CGAL/Interpolation/typedefs.h:10:0,
> from /home/yasi/cgal-bindings/build/CGAL-3.9_release/SWIG_CGAL/Interpolation/CGAL_InterpolationPYTHON_wrap.cxx:3274:
> /usr/include/CGAL/natural_neighbor_coordinates_2.h:158:3: note: candidate expects 3 arguments, 4 provided
> dt.get_boundary_of_conflicts(p, std::back_inserter(hole), fh, false);
> ^
> make[2]: *** [SWIG_CGAL/Interpolation/CMakeFiles/_CGAL_Interpolation.dir/CGAL_InterpolationPYTHON_wrap.cxx.o] Error 1
> make[1]: *** [SWIG_CGAL/Interpolation/CMakeFiles/_CGAL_Interpolation.dir/all] Error 2
> make[1]: *** Waiting for unfinished jobs....
> virtual memory exhausted: Cannot allocate memory
> make[2]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o] Error 1
> make[1]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/all] Error 2
> make: *** [all] Error 2
>
> This is actually end of the messages, there is more.
> I understand that git pull means get the last version but I'm not sure how I can use it here.
>
> <javascript:>
> > <mailto:cgal-bindings-di...@googlegroups.com
> <javascript:>>.
> > For more options, visit https://groups.google.com/d/optout
> <https://groups.google.com/d/optout>.
>
> --
> You received this message because you are subscribed to the Google
> Groups "CGAL Bindings discuss" group.
> To unsubscribe from this group and stop receiving emails from it, send
> an email to cgal-bindings-di...@googlegroups.com
> --
> You received this message because you are subscribed to the Google
> Groups "CGAL Bindings discuss" group.
> To unsubscribe from this group and stop receiving emails from it, send
> <mailto:cgal-bindings-di...@googlegroups.com>.
Yasaman shm
Jul 13, 2014, 7:35:41 PM7/13/14
to cgal-bindi...@googlegroups.com
Hi,
OK, I'm working on VMWare, My Ubuntu version is 14.04. My CGAL version in 4.2 and these are the commands I used again on a new machine:
OK, I'm working on VMWare, My Ubuntu version is 14.04. My CGAL version in 4.2 and these are the commands I used again on a new machine:
git clone https://code.google.com/p/cgal-bindings
cd cgal-bindings
cd cgal-bindings
mkdir build/CGAL-4.2_release -p
cd build/CGAL-4.2_release
cmake -DCGAL_DIR=/usr/lib/CGAL -DBUILD_PYTHON=ON -DBUILD_JAVA=OFF -DJAVA_OUTDIR_PREFIX=../../examples/java ../.. -DPYTHON_OUTDIR_PREFIX=../../examples/python ../..
make -j 4
The interesting part for me is that it goes through the make part partially then it get stuck at some point. Like for instance if I use make it will be stuck at %66 but when I'm using make -j 2 it goes up to %96 but not feather. I've used make -j 4 or even higher but no difference in the result. can it be because I'm using VMware? the error that it gives me is the same error in both situations. Like this:
[ 96%] Built target _CGAL_Surface_mesher
Built target _CGAL_Voronoi_diagram_2
Built target _CGAL_AABB_tree
Built target _CGAL_Triangulation_2
Building CXX object SWIG_CGAL/Alpha_shape_2/CMakeFiles/_CGAL_Alpha_shape_2.dir/CGAL_Alpha_shape_2PYTHON_wrap.cxx.o
Building CXX object SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o
In file included from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/typedefs.h:11:0,
from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/all_includes.h:10,
from /home/yasi/cgal-bindings/build/CGAL-4.2_release/SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2PYTHON_wrap.cxx:3137:
/home/yasi/cgal-bindings/SWIG_CGAL/Triangulation_2/Triangulation_2.h: In instantiation of ‘Triangulation_2_wrapper<Triangulation, Point, Vertex_handle, Face_handle, Weighted_tag>::Triangulation_2_wrapper(const cpp_base&) [with Triangulation = CGAL::Alpha_shape_2<CGAL::Delaunay_triangulation_2<CGAL::Epick, CGAL::Triangulation_data_structure_2<CGAL::Alpha_shape_vertex_base_2<CGAL::Epick>, CGAL::Alpha_shape_face_base_2<CGAL::Epick, CGAL::Triangulation_face_base_2<CGAL::Epick> >
.
.
.
.
/home/yasi/cgal-bindings/build/CGAL-4.2_release/SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2PYTHON_wrap.cxx:35074:227: required from here
/usr/include/CGAL/Alpha_shape_2.h:745:3: error: ‘CGAL::Alpha_shape_2<Dt, ExactAlphaComparisonTag>::Alpha_shape_2(const CGAL::Alpha_shape_2<Dt, ExactAlphaComparisonTag>&) [with Dt = CGAL::Regular_triangulation_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick>, CGAL::Triangulation_data_structure_2<CGAL::Alpha_shape_vertex_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick>, CGAL::Regular_triangulation_vertex_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick> > >, CGAL::Alpha_shape_face_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick>, CGAL::Regular_triangulation_face_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick> > > > >; ExactAlphaComparisonTag = CGAL::Boolean_tag<false>]’ is private
Alpha_shape_2(const Alpha_shape_2& A);
^
In file included from /home/yasi/cgal-bindings/SWIG_CGAL/Triangulation_2/Delaunay_triangulation_2.h:11:0,
from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/Alpha_shape_2.h:11,
from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/all_includes.h:11,
from /home/yasi/cgal-bindings/build/CGAL-4.2_release/SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2PYTHON_wrap.cxx:3137:
/home/yasi/cgal-bindings/SWIG_CGAL/Triangulation_2/Triangulation_2.h:84:77: error: within this context
Triangulation_2_wrapper(const cpp_base& base):data_sptr(new cpp_base(base)){}
^
make[2]: *** [SWIG_CGAL/Alpha_shape_2/CMakeFiles/_CGAL_Alpha_shape_2.dir/CGAL_Alpha_shape_2PYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Alpha_shape_2/CMakeFiles/_CGAL_Alpha_shape_2.dir/all] Error 2
cd build/CGAL-4.2_release
cmake -DCGAL_DIR=/usr/lib/CGAL -DBUILD_PYTHON=ON -DBUILD_JAVA=OFF -DJAVA_OUTDIR_PREFIX=../../examples/java ../.. -DPYTHON_OUTDIR_PREFIX=../../examples/python ../..
make -j 4
The interesting part for me is that it goes through the make part partially then it get stuck at some point. Like for instance if I use make it will be stuck at %66 but when I'm using make -j 2 it goes up to %96 but not feather. I've used make -j 4 or even higher but no difference in the result. can it be because I'm using VMware? the error that it gives me is the same error in both situations. Like this:
[ 96%] Built target _CGAL_Surface_mesher
Built target _CGAL_Voronoi_diagram_2
Built target _CGAL_AABB_tree
Built target _CGAL_Triangulation_2
Building CXX object SWIG_CGAL/Alpha_shape_2/CMakeFiles/_CGAL_Alpha_shape_2.dir/CGAL_Alpha_shape_2PYTHON_wrap.cxx.o
Building CXX object SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o
In file included from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/typedefs.h:11:0,
from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/all_includes.h:10,
from /home/yasi/cgal-bindings/build/CGAL-4.2_release/SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2PYTHON_wrap.cxx:3137:
/home/yasi/cgal-bindings/SWIG_CGAL/Triangulation_2/Triangulation_2.h: In instantiation of ‘Triangulation_2_wrapper<Triangulation, Point, Vertex_handle, Face_handle, Weighted_tag>::Triangulation_2_wrapper(const cpp_base&) [with Triangulation = CGAL::Alpha_shape_2<CGAL::Delaunay_triangulation_2<CGAL::Epick, CGAL::Triangulation_data_structure_2<CGAL::Alpha_shape_vertex_base_2<CGAL::Epick>, CGAL::Alpha_shape_face_base_2<CGAL::Epick, CGAL::Triangulation_face_base_2<CGAL::Epick> >
.
.
.
.
/home/yasi/cgal-bindings/build/CGAL-4.2_release/SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2PYTHON_wrap.cxx:35074:227: required from here
/usr/include/CGAL/Alpha_shape_2.h:745:3: error: ‘CGAL::Alpha_shape_2<Dt, ExactAlphaComparisonTag>::Alpha_shape_2(const CGAL::Alpha_shape_2<Dt, ExactAlphaComparisonTag>&) [with Dt = CGAL::Regular_triangulation_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick>, CGAL::Triangulation_data_structure_2<CGAL::Alpha_shape_vertex_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick>, CGAL::Regular_triangulation_vertex_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick> > >, CGAL::Alpha_shape_face_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick>, CGAL::Regular_triangulation_face_base_2<CGAL::Weighted_alpha_shape_euclidean_traits_2<CGAL::Epick> > > > >; ExactAlphaComparisonTag = CGAL::Boolean_tag<false>]’ is private
Alpha_shape_2(const Alpha_shape_2& A);
^
In file included from /home/yasi/cgal-bindings/SWIG_CGAL/Triangulation_2/Delaunay_triangulation_2.h:11:0,
from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/Alpha_shape_2.h:11,
from /home/yasi/cgal-bindings/SWIG_CGAL/Alpha_shape_2/all_includes.h:11,
from /home/yasi/cgal-bindings/build/CGAL-4.2_release/SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2PYTHON_wrap.cxx:3137:
/home/yasi/cgal-bindings/SWIG_CGAL/Triangulation_2/Triangulation_2.h:84:77: error: within this context
Triangulation_2_wrapper(const cpp_base& base):data_sptr(new cpp_base(base)){}
^
make[2]: *** [SWIG_CGAL/Alpha_shape_2/CMakeFiles/_CGAL_Alpha_shape_2.dir/CGAL_Alpha_shape_2PYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Alpha_shape_2/CMakeFiles/_CGAL_Alpha_shape_2.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
virtual memory exhausted: Cannot allocate memory
make[2]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/all] Error 2
make[1]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/all] Error 2
make: *** [all] Error 2
Thank you
Yasaman
On Wednesday, September 4, 2013 1:58:13 PM UTC-7, Willie Maddox wrote:
Sebastien Loriot (GeometryFactory)
Jul 15, 2014, 2:34:01 AM7/15/14
to cgal-bindi...@googlegroups.com
Could you try make 2>&1 | tee log and post log here?
Thanks,
Sebastien.
On 07/14/2014 01:35 AM, Yasaman shm wrote:
> Hi,
>
> OK, I'm working on VMWare, My Ubuntu version is 14.04. My CGAL version
> in 4.2 and these are the commands I used again on a new machine:
>
> git clone https://code.google.com/p/cgal-bindings
>
> cd cgal-bindings
>
> mkdir build/CGAL-4.2_release -p
>
> cd build/CGAL-4.2_release
>
> cmake -DCGAL_DIR=/usr/lib/CGAL -DBUILD_PYTHON=ON -DBUILD_JAVA=OFF
> -DJAVA_OUTDIR_PREFIX=../../examples/java ../..
> -DPYTHON_OUTDIR_PREFIX=../../examples/python ../..
>
> make -j 4
>
> The interesting part for me is that it goes through the make part
> partially then it get stuck at some point. Like for instance if I
> usemake it will be stuck at%66 but when I'm using make -j 2 it goes up
Thanks,
Sebastien.
On 07/14/2014 01:35 AM, Yasaman shm wrote:
> Hi,
>
> OK, I'm working on VMWare, My Ubuntu version is 14.04. My CGAL version
> in 4.2 and these are the commands I used again on a new machine:
>
> git clone https://code.google.com/p/cgal-bindings
>
> cd cgal-bindings
>
> mkdir build/CGAL-4.2_release -p
>
> cd build/CGAL-4.2_release
>
> cmake -DCGAL_DIR=/usr/lib/CGAL -DBUILD_PYTHON=ON -DBUILD_JAVA=OFF
> -DJAVA_OUTDIR_PREFIX=../../examples/java ../..
> -DPYTHON_OUTDIR_PREFIX=../../examples/python ../..
>
> make -j 4
>
> The interesting part for me is that it goes through the make part
> partially then it get stuck at some point. Like for instance if I
Sebastien Loriot (GeometryFactory)
Jul 15, 2014, 3:03:33 AM7/15/14
to cgal-bindi...@googlegroups.com
937fb76 should fix it.
Try to 'git pull', touch 'SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2.i''
(to force regeneration of package) and then 'make'
Sebastien.
Try to 'git pull', touch 'SWIG_CGAL/Alpha_shape_2/CGAL_Alpha_shape_2.i''
(to force regeneration of package) and then 'make'
Sebastien.
Yasaman shm
Jul 19, 2014, 4:13:08 PM7/19/14
to cgal-bindi...@googlegroups.com
Hi,
Thank you very much. It worked.
But I'm still not able to make %100. On %98 I get the memory exhausted error. Even though I increased the memory up to 7.8. I even used ulimit -v unlimited but no luck.
but It pass the %66 or %96 which I was stuck. Thank you.
[ 98%] Building CXX object SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o
Thank you very much. It worked.
But I'm still not able to make %100. On %98 I get the memory exhausted error. Even though I increased the memory up to 7.8. I even used ulimit -v unlimited but no luck.
but It pass the %66 or %96 which I was stuck. Thank you.
[ 98%] Building CXX object SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o
virtual memory exhausted: Cannot allocate memory
make[2]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/all] Error 2
make: *** [all] Error 2
Thank you
Yasaman
>> an email to cgal-bindings-discuss+unsub...@googlegroups.com
>> <mailto:cgal-bindings-discuss+unsub...@googlegroups.com>.
Sebastien Loriot (GeometryFactory)
Jul 28, 2014, 3:28:21 AM7/28/14
to cgal-bindi...@googlegroups.com
On 07/19/2014 10:13 PM, Yasaman shm wrote:
> Hi,
>
> Thank you very much. It worked.
> But I'm still not able to make %100. On %98 I get the memory exhausted
> error. Even though I increased the memory up to 7.8. I even used ulimit
> -v unlimited but no luck.
> but It pass the %66 or %96 which I was stuck. Thank you.
>
You said you're running in vmware, how much memory is allocated to the VM?
> Hi,
>
> Thank you very much. It worked.
> But I'm still not able to make %100. On %98 I get the memory exhausted
> error. Even though I increased the memory up to 7.8. I even used ulimit
> -v unlimited but no luck.
> but It pass the %66 or %96 which I was stuck. Thank you.
>
Sebastien
> >> an email to cgal-bindings-di...@googlegroups.com
> <javascript:>
> >> <mailto:cgal-bindings-di...@googlegroups.com
> <javascript:>>.
> <javascript:>
> >> <mailto:cgal-bindings-di...@googlegroups.com
> >> For more options, visit https://groups.google.com/d/optout
> <https://groups.google.com/d/optout>.
> >
>
> --
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Yasaman shm
Jul 29, 2014, 3:00:21 AM7/29/14
to cgal-bindi...@googlegroups.com
Yes it's a virtual machine
total used free shared buffers cached
Mem: 7066820 5363752 1703068 4408 23032 4716620
-/+ buffers/cache: 624100 6442720
Swap: 21378028 0 21378028
But still:
total used free shared buffers cached
Mem: 7066820 5363752 1703068 4408 23032 4716620
-/+ buffers/cache: 624100 6442720
Swap: 21378028 0 21378028
But still:
virtual memory exhausted: Cannot allocate memory
make[2]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/CGAL_Mesh_3PYTHON_wrap.cxx.o] Error 1
make[1]: *** [SWIG_CGAL/Mesh_3/CMakeFiles/_CGAL_Mesh_3.dir/all] Error 2
make: *** [all] Error 2
Thank you
Yasaman
> >> an email to cgal-bindings-discuss+unsub...@googlegroups.com
> <javascript:>
> >> <mailto:cgal-bindings-discuss+unsub...@googlegroups.com
> <javascript:>>.
> >> For more options, visit https://groups.google.com/d/optout
> <https://groups.google.com/d/optout>.
> >
>
> --
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Sebastien Loriot (GeometryFactory)
Jul 29, 2014, 3:44:17 AM7/29/14
to cgal-bindi...@googlegroups.com
Strange.
I tried:
> ulimit -v 4000000
> make _CGAL_Mesh_3
and it could compile without any problem.
I tried
> ulimit -v 1000000
and I got the same error message you had.
Maybe you're using an old compiler or you have another
process consuming memory (parallel build?)
Sebastien
> cgal-bindings-di...@googlegroups.com <javascript:>
> > <javascript:>
> > >>
> <mailto:cgal-bindings-di...@googlegroups.com
> <javascript:>
> <javascript:>
> > <mailto:cgal-bindings-di...@googlegroups.com
> <mailto:cgal-bindings-di...@googlegroups.com>.
I tried:
> ulimit -v 4000000
> make _CGAL_Mesh_3
and it could compile without any problem.
I tried
> ulimit -v 1000000
and I got the same error message you had.
Maybe you're using an old compiler or you have another
process consuming memory (parallel build?)
Sebastien
> > <javascript:>
> > >>
> <mailto:cgal-bindings-di...@googlegroups.com
> <javascript:>
> > <javascript:>>.
> > >> For more options, visit
> https://groups.google.com/d/optout <https://groups.google.com/d/optout>
> > <https://groups.google.com/d/optout
> <https://groups.google.com/d/optout>>.
> > >
> >
> > --
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Yasaman shm
Jul 30, 2014, 1:18:20 AM7/30/14
to cgal-bindi...@googlegroups.com
Hi,
I just did > Sudo apt-get update and upgrade, if this is what you mean. still the same error. Also I couldn't even run the
> ulimit -v 4000000
> make _CGAL_Mesh_3
I closed everything else even Firefox and also on my host computer just the VMware.
Thank you
Yasaman
Thank you
Yasaman
> cgal-bindings-discuss+unsub...@googlegroups.com <javascript:>
> > <javascript:>
> > >>
> <mailto:cgal-bindings-discuss+unsub...@googlegroups.com
> <javascript:>
> > <javascript:>>.
> > >> For more options, visit
> https://groups.google.com/d/optout <https://groups.google.com/d/optout>
> > <https://groups.google.com/d/optout
> <https://groups.google.com/d/optout>>.
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> >
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Vincent Rivola
Sep 9, 2014, 12:00:23 PM9/9/14
to cgal-bindi...@googlegroups.com
Dear All,
I reply in this thread because I have a similar compilation problem.
I am trying to compile the cgal-binding with CGal 4.5.
and I get the following error message:
[ 98%] Built target CGAL_Mesh_3
In file included from /home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/CGAL_Point_set_processing_3JAVA_wrap.cxx:281:0:
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h: In function ‘void jet_smooth_point_set(Wrapper_iterator_helper<Point_3>::input, unsigned int, unsigned int, unsigned int)’:
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:111:102: erreur: no matching function for call to ‘jet_smooth_point_set(std::vector<CGAL::Point_3<CGAL::Epick> >::iterator, std::vector<CGAL::Point_3<CGAL::Epick> >::iterator, unsigned int&, unsigned int&, unsigned int&)’
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:111:102: note: candidate is:
/usr/local/include/CGAL/jet_smooth_point_set.h:136:1: note: template<class InputIterator, class PointPMap, class Kernel, class SvdTraits> void CGAL::jet_smooth_point_set(InputIterator, InputIterator, PointPMap, unsigned int, const Kernel&, unsigned int, unsigned int)
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h: In function ‘void jet_estimate_normals(Wrapper_iterator_helper<Point_3>::input, Wrapper_iterator_helper<Vector_3>::output, unsigned int, unsigned int)’:
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:127:101: erreur: no matching function for call to ‘jet_estimate_normals(std::vector<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >::iterator, std::vector<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >::iterator, CGAL::First_of_pair_property_map<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >&, CGAL::Second_of_pair_property_map<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >&, unsigned int&, unsigned int&)’
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:127:101: note: candidate is:
/usr/local/include/CGAL/jet_estimate_normals.h:138:1: note: template<class ForwardIterator, class PointPMap, class NormalPMap, class Kernel, class SvdTraits> void CGAL::jet_estimate_normals(ForwardIterator, ForwardIterator, PointPMap, NormalPMap, unsigned int, const Kernel&, unsigned int)
make[2]: *** [SWIG_CGAL/Point_set_processing_3/CMakeFiles/CGAL_Point_set_processing_3.dir/CGAL_Point_set_processing_3JAVA_wrap.cxx.o] Erreur 1
make[1]: *** [SWIG_CGAL/Point_set_processing_3/CMakeFiles/CGAL_Point_set_processing_3.dir/all] Erreur 2
Could it be that the way to call functions jet_smooth_point_set and jet_estimate_normals() changed in version 4.5?
I tried to have a look at the code in CGAL, and there are multiple implementations of this functions.
One of them is similar to the one called from cgal-binding (at line 251) but apparently cgal-binding wants to use the implementation of line 136 which is recquiring more attributes.
Does someone has a solution?
I reply in this thread because I have a similar compilation problem.
I am trying to compile the cgal-binding with CGal 4.5.
and I get the following error message:
[ 98%] Built target CGAL_Mesh_3
In file included from /home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/CGAL_Point_set_processing_3JAVA_wrap.cxx:281:0:
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h: In function ‘void jet_smooth_point_set(Wrapper_iterator_helper<Point_3>::input, unsigned int, unsigned int, unsigned int)’:
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:111:102: erreur: no matching function for call to ‘jet_smooth_point_set(std::vector<CGAL::Point_3<CGAL::Epick> >::iterator, std::vector<CGAL::Point_3<CGAL::Epick> >::iterator, unsigned int&, unsigned int&, unsigned int&)’
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:111:102: note: candidate is:
/usr/local/include/CGAL/jet_smooth_point_set.h:136:1: note: template<class InputIterator, class PointPMap, class Kernel, class SvdTraits> void CGAL::jet_smooth_point_set(InputIterator, InputIterator, PointPMap, unsigned int, const Kernel&, unsigned int, unsigned int)
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h: In function ‘void jet_estimate_normals(Wrapper_iterator_helper<Point_3>::input, Wrapper_iterator_helper<Vector_3>::output, unsigned int, unsigned int)’:
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:127:101: erreur: no matching function for call to ‘jet_estimate_normals(std::vector<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >::iterator, std::vector<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >::iterator, CGAL::First_of_pair_property_map<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >&, CGAL::Second_of_pair_property_map<std::pair<CGAL::Point_3<CGAL::Epick>, CGAL::Vector_3<CGAL::Epick> > >&, unsigned int&, unsigned int&)’
/home/vincent/cgal-bindings/SWIG_CGAL/Point_set_processing_3/functions.h:127:101: note: candidate is:
/usr/local/include/CGAL/jet_estimate_normals.h:138:1: note: template<class ForwardIterator, class PointPMap, class NormalPMap, class Kernel, class SvdTraits> void CGAL::jet_estimate_normals(ForwardIterator, ForwardIterator, PointPMap, NormalPMap, unsigned int, const Kernel&, unsigned int)
make[2]: *** [SWIG_CGAL/Point_set_processing_3/CMakeFiles/CGAL_Point_set_processing_3.dir/CGAL_Point_set_processing_3JAVA_wrap.cxx.o] Erreur 1
make[1]: *** [SWIG_CGAL/Point_set_processing_3/CMakeFiles/CGAL_Point_set_processing_3.dir/all] Erreur 2
Could it be that the way to call functions jet_smooth_point_set and jet_estimate_normals() changed in version 4.5?
I tried to have a look at the code in CGAL, and there are multiple implementations of this functions.
One of them is similar to the one called from cgal-binding (at line 251) but apparently cgal-binding wants to use the implementation of line 136 which is recquiring more attributes.
Does someone has a solution?
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