[SyneRBI/PETRIC-backend] test image (PR #6)
Casper da Costa-Luis
You can view, comment on, or merge this pull request online at:
https://github.com/SyneRBI/PETRIC-backend/pull/6
Commit Summary
- 7f7e403 test image
File Changes
(1 file)
- M Dockerfile (13)
Patch Links:
- https://github.com/SyneRBI/PETRIC-backend/pull/6.patch
- https://github.com/SyneRBI/PETRIC-backend/pull/6.diff
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
@casperdcl commented on this pull request.
In Dockerfile:
> @@ -1,14 +1,7 @@ # FROM synerbi/sirf:edge-gpu AS sirf -# pin to https://github.com/SyneRBI/SIRF-SuperBuild/commit/5f1a7f498bf6f41551c19eb53798b5d33af43eec -FROM ghcr.io/synerbi/sirf@sha256:2ef963a861bf18346da511d80c3a15eb7f154131224367a2c66578101602c6e0 AS sirf -# monai installs torch, so uninstall it -RUN conda install -y monai tensorboard tensorboardx jupytext && pip uninstall -y torch && conda clean -afy -RUN conda install -y cudatoolkit=11.8 && conda clean -afy -#RUN conda install -y -c conda-forge -c nvidia tensorflow-gpu=2.14 && conda clean -afy -RUN pip install --no-cache-dir tensorflow[and-cuda]==2.14 -#RUN conda install -y -c pytorch -c nvidia pytorch pytorch-cuda=11.8 && conda clean -afy -RUN pip install --no-cache-dir torch --index-url https://download.pytorch.org/whl/cu118 -#RUN pip install --no-cache-dir tensorflow[and-cuda]==2.14 torch --extra-index-url https://download.pytorch.org/whl/cu118 +FROM synerbi/sirf:petric2026-rc.1 AS sirf
From SyneRBI/SIRF-SuperBuild#946 so maybe better temp tag name should be
⬇️ Suggested change-FROM synerbi/sirf:petric2026-rc.1 AS sirf +FROM synerbi/sirf:SB946 AS sirf
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
> @@ -1,14 +1,7 @@ # FROM synerbi/sirf:edge-gpu AS sirf -# pin to https://github.com/SyneRBI/SIRF-SuperBuild/commit/5f1a7f498bf6f41551c19eb53798b5d33af43eec -FROM ghcr.io/synerbi/sirf@sha256:2ef963a861bf18346da511d80c3a15eb7f154131224367a2c66578101602c6e0 AS sirf -# monai installs torch, so uninstall it -RUN conda install -y monai tensorboard tensorboardx jupytext && pip uninstall -y torch && conda clean -afy -RUN conda install -y cudatoolkit=11.8 && conda clean -afy -#RUN conda install -y -c conda-forge -c nvidia tensorflow-gpu=2.14 && conda clean -afy -RUN pip install --no-cache-dir tensorflow[and-cuda]==2.14 -#RUN conda install -y -c pytorch -c nvidia pytorch pytorch-cuda=11.8 && conda clean -afy -RUN pip install --no-cache-dir torch --index-url https://download.pytorch.org/whl/cu118 -#RUN pip install --no-cache-dir tensorflow[and-cuda]==2.14 torch --extra-index-url https://download.pytorch.org/whl/cu118
+FROM synerbi/sirf:petric2026-rc.1 AS sirf +RUN conda install -y tensorboard tensorboardx jupytext && conda clean -afy +RUN pip install --no-cache-dir git+https://github.com/Project-MONAI/MO...@1.5.1 tensorflow[and-cuda]==2.20 --extra-index-url https://download.pytorch.org/whl/cu128
MONAI depends on torch, but maybe should be here explicitly for clarity?
-RUN pip install --no-cache-dir git+https://github.com/Project-MONAI/MO...@1.5.1 tensorflow[and-cuda]==2.20 --extra-index-url https://download.pytorch.org/whl/cu128 +RUN pip install --no-cache-dir git+https://github.com/Project-MONAI/MO...@1.5.1 torch tensorflow[and-cuda]==2.20 --extra-index-url https://download.pytorch.org/whl/cu128
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
@casperdcl pushed 1 commit.
- 3432aeb minor tidy
—
View it on GitHub or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
> @@ -1,14 +1,7 @@ # FROM synerbi/sirf:edge-gpu AS sirf -# pin to https://github.com/SyneRBI/SIRF-SuperBuild/commit/5f1a7f498bf6f41551c19eb53798b5d33af43eec -FROM ghcr.io/synerbi/sirf@sha256:2ef963a861bf18346da511d80c3a15eb7f154131224367a2c66578101602c6e0 AS sirf -# monai installs torch, so uninstall it -RUN conda install -y monai tensorboard tensorboardx jupytext && pip uninstall -y torch && conda clean -afy -RUN conda install -y cudatoolkit=11.8 && conda clean -afy -#RUN conda install -y -c conda-forge -c nvidia tensorflow-gpu=2.14 && conda clean -afy -RUN pip install --no-cache-dir tensorflow[and-cuda]==2.14 -#RUN conda install -y -c pytorch -c nvidia pytorch pytorch-cuda=11.8 && conda clean -afy -RUN pip install --no-cache-dir torch --index-url https://download.pytorch.org/whl/cu118 -#RUN pip install --no-cache-dir tensorflow[and-cuda]==2.14 torch --extra-index-url https://download.pytorch.org/whl/cu118
+FROM synerbi/sirf:SB946 AS sirf
TODO: fix this (merge & point to a sha)
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
@casperdcl pushed 1 commit.
- b321896 v2 paths
—
View it on GitHub or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
@casperdcl pushed 1 commit.
- b2929e6 v2 paths
—
View it on GitHub or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
@casperdcl pushed 1 commit.
- 00793eb update image
—
View it on GitHub or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
@casperdcl pushed 3 commits.
—
View it on GitHub or unsubscribe.
You are receiving this because you are subscribed to this thread.
Casper da Costa-Luis
Merged #6 into main.
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you are subscribed to this thread.