[SyneRBI/SIRF] GitHub Actions fail on MR tests (Issue #1267)

0 views
Skip to first unread message

Kris Thielemans

unread,
Jun 17, 2024, 8:09:40 PM (12 days ago) Jun 17
to SyneRBI/SIRF, Subscribed

https://github.com/SyneRBI/SIRF/actions/runs/9556091923/job/26340671249#step:9:1053

E               ValueError: cannot fill AcquisitionData of size (np.int32(512), np.int32(8), np.int32(256)) with data of size (1, 1, 8, 131072)

@evgueni-ovtchinnikov this is rather strange, as the recent commit didn't change anything in Gadgetron.


Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267@github.com>

Kris Thielemans

unread,
Jun 19, 2024, 4:39:05 AM (10 days ago) Jun 19
to SyneRBI/SIRF, Subscribed

@evgueni-ovtchinnikov this prevents images being build, so needs urgent attention. sorry


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267/2178097987@github.com>

Evgueni Ovtchinnikov

unread,
Jun 19, 2024, 6:54:32 AM (10 days ago) Jun 19
to SyneRBI/SIRF, Subscribed

the failure happens when testing test_imagedata_constructor.py, but SIRF master does not have this script!

apparently, GitHub Actions do some other branch - how can we find which one?


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267/2178377859@github.com>

Kris Thielemans

unread,
Jun 19, 2024, 7:35:24 AM (10 days ago) Jun 19
to SyneRBI/SIRF, Subscribed

we have https://github.com/SyneRBI/SIRF/blob/master/.github/workflows/build-test.yml
and https://github.com/SyneRBI/SIRF-SuperBuild/blob/master/version_config.cmake of course.


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267/2178474104@github.com>

Evgueni Ovtchinnikov

unread,
Jun 19, 2024, 8:00:10 AM (10 days ago) Jun 19
to SyneRBI/SIRF, Subscribed

the failure happens when testing test_imagedata_constructor.py, but SIRF master does not have this script!

found it (scrollbar does not show on VM unless you move the cursor to the window edge), sorry for the false alarm!

on my VM runs ok, so have to debug via GitHub Actions


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267/2178518633@github.com>

Evgueni Ovtchinnikov

unread,
Jun 19, 2024, 12:07:50 PM (10 days ago) Jun 19
to SyneRBI/SIRF, Subscribed

looks fixed

likely reason was the change of numpy version, details tomorrow


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267/2179051712@github.com>

Kris Thielemans

unread,
Jun 19, 2024, 12:26:20 PM (10 days ago) Jun 19
to SyneRBI/SIRF, Subscribed

ok. Indeed, we're getting numpy 2.0 now. It'd make sense that it's an external change causing this problem now.


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267/2179085725@github.com>

Evgueni Ovtchinnikov

unread,
Jun 21, 2024, 5:28:05 AM (8 days ago) Jun 21
to SyneRBI/SIRF, Subscribed

fixed by 8e8d95b


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issues/1267/2182377522@github.com>

Evgueni Ovtchinnikov

unread,
Jun 21, 2024, 5:28:06 AM (8 days ago) Jun 21
to SyneRBI/SIRF, Subscribed

Closed #1267 as completed.


Reply to this email directly, view it on GitHub, or unsubscribe.

You are receiving this because you are subscribed to this thread.Message ID: <SyneRBI/SIRF/issue/1267/issue_event/13240056878@github.com>

Reply all
Reply to author
Forward
0 new messages