I have a question about Oncoprint.

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Mar 8, 2023, 10:06:24 PMMar 8
to cbiop...@googlegroups.com
Dear to whom it may concern

Oncoprint does not show genes with 0% mutation rate. How can I add genes with 0% mutation rate to the table?
I have a question: "How can I add a gene with a mutation rate of 0% to the table?


Shiro Uchida

de Bruijn, Ino

Mar 8, 2023, 10:10:16 PMMar 8
to 内田士朗, cbiop...@googlegroups.com

Hi Shiro Uchida,


Thanks for reaching out!


Just to clarify your question. I see the website can show genes with 0% mutation rate, see e.g.:




But I’m guessing you are asking how one can show a 0% alteration rate using the oncoprinter here:




This is currently not possible as far as I know, but will confirm. One other option is to download the resulting oncoprint as an SVG and add the gene with 0% manually




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