Mutation Mapper - no lollipop

[Andrea Yung]

Hi! 

I'm trying to use mutation mapper to visualize some variants attached below. When I copy and paste the information into Mutation Mapper, it generates the right TP53 map with a list of annotations, but no lollipops appear on the plot. Is there anything I've missed?

Thanks,

Andrea

[Benjamin Gross]

Hi Andrea,

It looks the MutationMapper tool wants the data in tab (or space delimited format).  Also, for lollipop rendering, the columns should start with Chromosome, Start_Position, End_Position, Reference_Allele, and Variant_Allele.

Best,

-Benjamin

Chromosome	Start_Position	End_Position	Reference_Allele	Variant_Allele
17	7673821	7673821	C	G
17	7673821	7673821	C	T
17	7675189	7675189	C	G
17	7674246	7674246	C	A
17	7675113	7675113	C	T
17	7675119	7675119	C	T
17	7670649	7670649	C	T
17	7676215	7676215	C	T
17	7674945	7674945	C	T
17	7674951	7674951	C	T
17	7674954	7674954	C	T

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<Test_MutationMapper - Sheet1.csv>