kindly request a revision of the clinical information codes

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tooearly

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Aug 19, 2025, 10:11:17 AMAug 19

to cbiop...@googlegroups.com, 심주현, 안지현, 오지혜

Subject: Official Request for Revision of Clinical Information Codes

To the cBioPortal Team,

I hope this message finds you well.

First of all, I would like to sincerely thank you for creating and maintaining such a valuable and helpful database like cBioPortal.

It has been an essential resource for our research community.

We recently downloaded the dataset from the site, which corresponds to the genomic data previously deposited by our group at Asan Medical Center: Liver Hepatocellular Carcinoma (AMC, Hepatology 2014).

In the clinical information, we noticed that the Cancer Type Detailed field is currently listed as Hepatocellular adenoma. We kindly request that this be corrected to Hepatocellular carcinoma. Additionally, the Oncotree Code is recorded as LIAD, but it should be updated to LIHC.

For your reference, I have attached the downloaded file from "https://www.cbioportal.org/study/clinicalData?id=lihc_amc_prv".

Please let us know if there are any additional steps required on our part. We would be happy to provide any further information if needed.

Once again, we are deeply grateful for your dedicated efforts in running and maintaining cBioPortal.

Sincerely,

Chang Ohk Sung

Chang Ohk Sung MD,PhD

Professor, Dept. of Pathology & AMIST,

Asan Medical Center, Univ. of Ulsan College of Medicine

Director, BI core lab, Asan Institute for Life Science

lihc_amc_prv_clinical_data.xlsx

Nikolaus Schultz

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Aug 19, 2025, 10:14:32 AMAug 19

to tooearly, cBioPortal for Cancer Genomics Discussion Group, 심주현, 안지현, 오지혜, Kundra, Ritika

Dear Chang,

Thank you for reaching out to us. I have cc’d Ritika, who leads our curation team. They can make the requested change.

Niki.

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