how to integrate Cancer Digital Slide Archive (CDSA) into local cbioportal?

[Y Chen]

Hi,

We host a local version of cbioportal. 

How do we integrate Cancer Digital Slide Archive (CDSA) into our cbioportal to get similar interface like this link below?

https://www.cbioportal.org/patient/tissueImage?caseId=TCGA-DH-5142&studyId=lgg_tcga 

We want to host our own images at the end, but maybe start with showing the same interface and the public image from Cancer Digital Slide Archive (CDSA). 

Is there documentation about how to do this, or should I contact people in Cancer Digital Slide Archive (CDSA)?

Thank you so much for your help!

Yingfei

[JJ Gao]

Dear Yingfei,

The cBioPortal CDSI integration is simply an i-frame to the CDSA website (https://cancer.digitalslidearchive.org/). In order for you to achieve similar results, you would need to install CDSA or some other image viewer, which can be integrated into the cBioPortal using Resources format (https://docs.cbioportal.org/file-formats/#resource-data)

Best,

-JJ

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