MSK patient sample ID

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Thierry Soussi

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Nov 21, 2022, 2:16:30 PM11/21/22
to cBioPortal for Cancer Genomics Discussion Group

I can't find anymore the code used for patients from mSK

P-0044860-T01-IM6

I known that P-0044860 is patient ID but the second and third code (T01 and IM6) ?

where can I find this list

thank you

Thierry

Benjamin Gross

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Nov 21, 2022, 3:14:37 PM11/21/22
to Thierry Soussi, cBioPortal for Cancer Genomics Discussion Group
Hi Thierry,

T01 means this is the first tumor sample sequenced belonging to the patient.  IM6 is the assay/gene-panel identifier (v6 of MSK-IMPACT assay - 468 genes profiled).

Best,
Benjamin

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