Searching for a specific Mutation Type

[John Francis]

Is there any way to search for samples with a specific mutation type (FS) within cBioPortal application?  Thank you.

[John Francis]

Is there a way to search using onco query language where you do not have to specify the gene name.  I do not want to search by gene name...I want the query to return all of the genes that have the specified mutation type.  Thank you.

TP53: MUT = TRUNC INFRAME

[de Bruijn, Ino]

Hi John,

The UI doesn't support this at the moment but you can try it in our new chat interface:

https://chat.cbioportal.org/share/iihNjgBMGaqsUgoV-wLWX

See prototype here: https://chat.cbioportal.org. Let us know what you think. Great if you can provide feedback via thumbs up/down buttons in the interface

Thanks so much!

Ino

From: cbiop...@googlegroups.com <cbiop...@googlegroups.com> on behalf of John Francis <jmf...@gmail.com>
Date: Tuesday, March 3, 2026 at 11:36 AM
To: cBioPortal for Cancer Genomics Discussion Group <cbiop...@googlegroups.com>
Subject: [EXTERNAL] [cbioportal] Re: Searching for a specific Mutation Type

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[John Francis]

Hi Ino,

Thank you for your response.

Is that query possible through API calls (search for genes with a specified mutation type)? 

Thank you 

John Francis

[John Francis]

Can anyone answer my question above regarding API?  Thank you, John