Error when doing a gene query

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Marc Deloger

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Jul 6, 2021, 7:04:07 AMJul 6
to cBioPortal for Cancer Genomics Discussion Group
Hi all,

I just installed the last cbioportal version : 

{"portalVersion":"3.6.19-dirty-SNAPSHOT","dbVersion":"2.12.8","gitBranch":"11f1579f156a2762af9120effdaa26518a0e1da5","gitCommitId":"11f1579f156a2762af9120effdaa26518a0e1da5","gitCommitIdDescribe":"v3.6.19-dirty","gitCommitIdDescribeShort":"v3.6.19-dirty","gitCommitMessageFull":"use new frontend commit of v3.6.19","gitCommitMessageShort":"use new frontend commit of v3.6.19","gitCommitMessageUserEmail":"i...@ino.bio","gitCommitMessageUserName":"Ino de Bruijn","gitDirty":true}

And I have imported a public study downladed from cbioportal datahub : https://cbioportal-datahub.s3.amazonaws.com/brca_tcga_pan_can_atlas_2018.tar.gz

But when I try to query whatever gene (TP53 and/or PIK3CA), here the error I obtain : 

{"req":{"method":"POST","url":"//31.10.14.160:8081/api/molecular-data/fetch?projection=META","data":{"entrezGeneIds":[7157],"sampleMolecularIdentifiers":[{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-3C-AAAU-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-3C-AAAU-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-3C-AAAU-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-3C-AAAU-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-3C-AALI-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-3C-AALI-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-3C-AALI-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-3C-AALI-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-3C-AALJ-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-3C-AALJ-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-3C-AALJ-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-3C-AALJ-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-3C-AALK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-3C-AALK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-3C-AALK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-3C-AALK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-4H-AAAK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-4H-AAAK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-4H-AAAK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-4H-AAAK-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-5L-AAT0-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-5L-AAT0-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-5L-AAT0-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-5L-AAT0-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-5T-A9QA-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-5T-A9QA-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-5T-A9QA-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-5T-A9QA-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-A1-A0SB-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-A1-A0SB-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-A1-A0SB-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-A1-A0SB-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-A1-A0SD-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-A1-A0SD-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-A1-A0SD-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-A1-A0SD-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-A1-A0SE-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-A1-A0SE-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-A1-A0SE-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-A1-A0SE-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-A1-A0SF-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-A1-A0SF-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-A1-A0SF-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantification","sampleId":"TCGA-A1-A0SF-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","sampleId":"TCGA-A1-A0SG-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rna_seq_v2_mrna_median_normals","sampleId":"TCGA-A1-A0SG-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_rppa","sampleId":"TCGA-A1-A0SG-01"},{"molecularProfileId":"brca_tcga_pan_can_atlas_2018_protein_quantifi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