Access to the China Pan-cancer (OrigiMed2020)

[Yosef Maruvka]

Hello,

I'm a PI in the Technion that uses your website in many projects and enjoy your vast work. Thanks about that!

Is there a way to download the data that is associated with the dataset "China Pan-cancer (OrigiMed2020)"? If so, how?

Thanks in advance,

Yosi

Yosef E. Maruvka

Assistant Professor

Biotechnology and Food Engineering

Lokey Center for Life Science and Engineering

Technion

Israel

www.maruvkalab.com

[Benjamin Gross]

Hi Yosi,

Usually all of our public studies are found at the following location, organized by study id, but I don’t see a folder for the pan_origimed_2020.  I’ve added Ritika Kundra, our lead curator on this thread.  Ritika, do you know where the pan_origimed_2020 datasets are located?

Best,

-Benjamin

https://github.com/cBioPortal/datahub/tree/master/public

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[Yosef Maruvka]

Hi Benjamin,

Thaks for the quick response. 

I will wait to hear Ritika's answer.

Thanks,

Yosi

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From: Benjamin Gross <benjami...@gmail.com>
Sent: Monday, July 4, 2022 3:53 PM
To: Yosef Maruvka <yosi.m...@bfe.technion.ac.il>; Kundra, Ritika/Sloan Kettering Institute <kun...@mskcc.org>
Cc: cbiop...@googlegroups.com <cbiop...@googlegroups.com>
Subject: Re: [cbioportal] Access to the China Pan-cancer (OrigiMed2020)

 

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[kun...@mskcc.org]

Hi Yosi,

 

For this particular study, the authors have not given us the permission to share the data yet. We are still waiting to get a green light from them. We will add an update as soon as we get a go ahead.

 

Thanks,

Ritika

 

From: Benjamin Gross <benjami...@gmail.com>

Date: Monday, July 4, 2022 at 8:53 AM
To: Yosef Maruvka <yosi.m...@bfe.technion.ac.il>, "Kundra, Ritika/Sloan Kettering Institute" <kun...@mskcc.org>
Cc: "cbiop...@googlegroups.com" <cbiop...@googlegroups.com>

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[Yosef Maruvka]

Hi Rikita,

Thanks for your response.

Is there a way for me to contact the authors and ask their permission?

Best,

Yosi

Get Outlook for Android

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From: kun...@mskcc.org <kun...@mskcc.org>
Sent: Tuesday, July 5, 2022 5:55:34 PM
To: benjami...@gmail.com <benjami...@gmail.com>; Yosef Maruvka <yosi.m...@bfe.technion.ac.il>
Cc: cbiop...@googlegroups.com <cbiop...@googlegroups.com>
Subject: Re: Re: [cbioportal] Access to the China Pan-cancer (OrigiMed2020)