about tcga files

[cagdas]

Hi,
The Gleason score (column J) in the ssf_tumor_samples_prad file in the TCGA database differs from the Gleason score (column I) in the nationwideshildrensorg_clinical_patient_prad file. Which of these files should we use for analysis, and what are the differences between the contents of these files? Which files contain the most up-to-date information?

[JJ Gao]

Hi,

Would you please clarify whether you got these files from cBioPortal? If so, please let us know the link ot these files.

Best,

-JJ

On Fri, Jul 19, 2024 at 10:59 AM cagdas <bioi...@gmail.com> wrote:

Hi,
The Gleason score (column J) in the ssf_tumor_samples_prad file in the TCGA database differs from the Gleason score (column I) in the nationwideshildrensorg_clinical_patient_prad file. Which of these files should we use for analysis, and what are the differences between the contents of these files? Which files contain the most up-to-date information?

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