Bulk download of pathology reports

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DM Marz

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Sep 26, 2016, 10:08:47 AM9/26/16
to cbiop...@googlegroups.com, Javier Orozco
Hi cbioportal team, 
Is there any way to generate a link to bulk download the TCGA BRCA Pathology reports?

Thank you very much!
diego

zack...@gmail.com

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Sep 26, 2016, 2:37:31 PM9/26/16
to cBioPortal for Cancer Genomics Discussion Group, javier.i...@gmail.com, dmar...@gmail.com
Hi Diego,

You can use the GDC Legacy archive to download the files: TCGA BRCA Pathology Reports

These are the same files we are using on the portal.

Zack

DM Marz

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Sep 26, 2016, 4:13:32 PM9/26/16
to zack...@gmail.com, cBioPortal for Cancer Genomics Discussion Group, Javier Orozco
Hi Zack,
Thank you very much, 
it worked perfectly

Best, 
Diego
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