cBioPortal retrieval error

[Jane Kim]

Hello!

I received this error while trying to retrieve data. Thank you for your help!

{"req":{"method":"GET","url":"//www.cbioportal.org/api/column-store/studies/ucec_tcga_pan_can_atlas_2018/samples/TCGA-FI-A2F4-01","headers":{"accept":"application/json"}},"xhr":{"_url":"//www.cbioportal.org/api/column-store/studies/ucec_tcga_pan_can_atlas_2018/samples/TCGA-FI-A2F4-01"},"text":"{\"timestamp\":1753725548332,\"status\":500,\"error\":\"Internal Server Error\",\"path\":\"/api/column-store/studies/ucec_tcga_pan_can_atlas_2018/samples/TCGA-FI-A2F4-01\"}","statusText":"","statusCode":500,"status":500,"statusType":5,"info":false,"ok":false,"redirect":false,"clientError":false,"serverError":true,"error":{"status":500,"method":"GET","url":"//www.cbioportal.org/api/column-store/studies/ucec_tcga_pan_can_atlas_2018/samples/TCGA-FI-A2F4-01"},"created":false,"accepted":false,"noContent":false,"badRequest":false,"unauthorized":false,"notAcceptable":false,"forbidden":false,"notFound":false,"unprocessableEntity":false,"headers":{"cache-control":"no-cache, no-store, max-age=0, must-revalidate","content-encoding":"gzip","content-type":"application/json","date":"Mon, 28 Jul 2025 17:59:08 GMT","elapsed-time":"0","expires":"0","pragma":"no-cache","strict-transport-security":"max-age=31536000; includeSubDomains","vary":"origin,access-control-request-method,access-control-request-headers,accept-encoding","x-content-type-options":"nosniff","x-firefox-spdy":"h2","x-frame-options":"DENY","x-xss-protection":"0"},"header":{"cache-control":"no-cache, no-store, max-age=0, must-revalidate","content-encoding":"gzip","content-type":"application/json","date":"Mon, 28 Jul 2025 17:59:08 GMT","elapsed-time":"0","expires":"0","pragma":"no-cache","strict-transport-security":"max-age=31536000; includeSubDomains","vary":"origin,access-control-request-method,access-control-request-headers,accept-encoding","x-content-type-options":"nosniff","x-firefox-spdy":"h2","x-frame-options":"DENY","x-xss-protection":"0"},"type":"application/json","links":{},"body":{"timestamp":1753725548332,"status":500,"error":"Internal Server Error","path":"/api/column-store/studies/ucec_tcga_pan_can_atlas_2018/samples/TCGA-FI-A2F4-01"},"url":"https://www.cbioportal.org/patient?sampleId=TCGA-FI-A2F4-01&studyId=ucec_tcga_pan_can_atlas_2018"}

**********************

Jane C. Kim, Ph.D. 

Associate Professor, Faculty Fellow for Committee for Undergraduate Research (CUGR) and STEM-NET

California State University San Marcos

Department of Biological Sciences

Science Hall 1, 309

333 S. Twin Oaks Valley Road
San Marcos, CA 92096

(760) 750-8584

[JJ Gao]

Thank you for reporting this to us. We have experienced some website issue today and it has been fixed now. 

Sorry for the inconvenience. Please try again and let us know if the problem persists.

Best,

-JJ

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[Jane Kim]

Thank you for your help, JJ!

**********************

Jane C. Kim, Ph.D. 

Associate Professor, Faculty Fellow for Committee for Undergraduate Research (CUGR) and STEM-NET

California State University San Marcos

Department of Biological Sciences

Science Hall 1, 309

333 S. Twin Oaks Valley Road
San Marcos, CA 92096

(760) 750-8584

---

From: JJ Gao <jianji...@gmail.com>
Sent: Monday, July 28, 2025 1:43 PM
To: Jane Kim <jc...@csusm.edu>
Cc: cbiop...@googlegroups.com <cbiop...@googlegroups.com>
Subject: Re: [cbioportal] cBioPortal retrieval error

 

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