Groups
Conversations
All groups and messages
Send feedback to Google
Help
Training
Sign in
Groups
cBioPortal for Cancer Genomics Discussion Group
Conversations
Labels
About
Groups keyboard shortcuts have been updated
Dismiss
See shortcuts
cBioPortal for Cancer Genomics Discussion Group
1–30 of 5126
This mailing list is for questions that are related to
cbioportal.org
. In order to filter out spams, every message is moderated. If you don't see your message posted immediately, it will be moderated and posted later.
Mark all as read
Report group
0 selected
Schneider, Katharina
, …
JJ Gao
3
May 21
Neuroblastoma studies archived?
Hi Katharine, Sorry for hte issue. Thanks for contacting us. Would you please give us some more
unread,
Neuroblastoma studies archived?
Hi Katharine, Sorry for hte issue. Thanks for contacting us. Would you please give us some more
May 21
Ana Clara Carrera
, …
Lafaure Rachel
11
May 20
cBioPortal user reported error
Bonjour, Je me permet de vous contacter suite à un message d'erreur que j'ai depuis quelques
unread,
cBioPortal user reported error
Bonjour, Je me permet de vous contacter suite à un message d'erreur que j'ai depuis quelques
May 20
Lucas Wang
, …
Lucas Wang
8
May 19
Mutations
There is no functional impact data. Is this correct? On Mon, May 19, 2025 at 2:33 AM Zeynep Karagöz
unread,
Mutations
There is no functional impact data. Is this correct? On Mon, May 19, 2025 at 2:33 AM Zeynep Karagöz
May 19
Alina Steege
, …
Joseph Cappadona
3
May 19
legend mutations
Based on this PR -- https://github.com/cBioPortal/cbioportal-frontend/pull/5057#issue-2700890487 --
unread,
legend mutations
Based on this PR -- https://github.com/cBioPortal/cbioportal-frontend/pull/5057#issue-2700890487 --
May 19
Harika Gannu
, …
de Bruijn, Ino
7
May 13
compatible keycloak version for cbioportal version 6.0.24
Hi Niels, Thanks for checking in – replied here: https://github.com/cBioPortal/cbioportal/issues/
unread,
Completed
compatible keycloak version for cbioportal version 6.0.24
Hi Niels, Thanks for checking in – replied here: https://github.com/cBioPortal/cbioportal/issues/
May 13
Pietro Guerra
,
Tali Mazor
2
May 13
cBioPortal
Hi Pietro, There is not currently a way to perform differential pathway analysis between groups. We
unread,
cBioPortal
Hi Pietro, There is not currently a way to perform differential pathway analysis between groups. We
May 13
Alok Swaroop
, …
Sumer, Selcuk
3
May 12
Mutation Mapper 3D viewer
Hi Alok, Unfortunately, the feature is currently broken due to a backward incompatibility issue with
unread,
Mutation Mapper 3D viewer
Hi Alok, Unfortunately, the feature is currently broken due to a backward incompatibility issue with
May 12
Leon Serrano, Javier
, …
Morris, Luc
5
May 9
Error message
Ty! Works! Luc On May 9, 2025, at 2:11 PM, Tali Mazor <tma...@ds.dfci.harvard.edu> wrote: Hi
unread,
Error message
Ty! Works! Luc On May 9, 2025, at 2:11 PM, Tali Mazor <tma...@ds.dfci.harvard.edu> wrote: Hi
May 9
Shanze Khan
,
Tali Mazor
2
May 9
Error after submit the query
Hi Shanze, Thanks for reaching out. We were experiencing some technical issues but they are now
unread,
Error after submit the query
Hi Shanze, Thanks for reaching out. We were experiencing some technical issues but they are now
May 9
Clayton, Adam
,
Tali Mazor
2
May 9
Error validating gene symbols
Hi Adam, Thanks for reaching out. We were experiencing some technical issues but they are now
unread,
Error validating gene symbols
Hi Adam, Thanks for reaching out. We were experiencing some technical issues but they are now
May 9
Nuri Temiz
, …
Tali Mazor
3
May 9
error
Hi Jessica, Thanks for reaching out. We were experiencing some technical issues but they are now
unread,
error
Hi Jessica, Thanks for reaching out. We were experiencing some technical issues but they are now
May 9
Eason, Matthew
,
Aaron L
2
May 9
Hi Matthew, We are experiencing some technical issues which look to be resolved now. On Fri, May 9,
unread,
Hi Matthew, We are experiencing some technical issues which look to be resolved now. On Fri, May 9,
May 9
Altwegg, Kristin (NIH/NCATS) [F]
,
Tali Mazor
3
May 8
Question about getting transcriptomic profiles from CBioPortal
Dear Tali, This is great advice! Thank you so much for the detailed email, I am incredibly
unread,
Question about getting transcriptomic profiles from CBioPortal
Dear Tali, This is great advice! Thank you so much for the detailed email, I am incredibly
May 8
Taylor Firman
, …
Tali Mazor
3
May 7
cBioPortal Scavenger Hunt
Hi Taylor - I'm so glad that helped! Please do let us know how it goes. Getting contributors to
unread,
cBioPortal Scavenger Hunt
Hi Taylor - I'm so glad that helped! Please do let us know how it goes. Getting contributors to
May 7
Harry Sun
,
Ramya Madupuri
8
May 5
Ramya Madupuri, How to import Microbiome data into cBioportal?
Hi Harry, Just to confirm, you loaded the Microbiome Signature data, but when you selected a few
unread,
Ramya Madupuri, How to import Microbiome data into cBioportal?
Hi Harry, Just to confirm, you loaded the Microbiome Signature data, but when you selected a few
May 5
Dr Chirantan Bose
,
JJ Gao
2
May 5
Regarding Breast cancer Transcriptomics data
Dear Dr Chirantan Bose, Sorry we do not have user support by call. Would you please let us know if
unread,
Regarding Breast cancer Transcriptomics data
Dear Dr Chirantan Bose, Sorry we do not have user support by call. Would you please let us know if
May 5
Vincent Duchaos
, …
Baby Anusha Satravada
5
May 1
Errors when importing public studies on a local instance
Hi Vincent, Thanks for the follow-up and for clarifying. We understand the issue and are actively
unread,
Errors when importing public studies on a local instance
Hi Vincent, Thanks for the follow-up and for clarifying. We understand the issue and are actively
May 1
Das, Biswajit (NIH/NCI) [C]
, …
Ritika Kundra
6
May 1
Uploading NCI PDMR data for cBioPortal
Thank you. From: Ritika Kundra <ritika...@gmail.com> Date: Thursday, May 1, 2025 at 09:50
unread,
Uploading NCI PDMR data for cBioPortal
Thank you. From: Ritika Kundra <ritika...@gmail.com> Date: Thursday, May 1, 2025 at 09:50
May 1
Nastase, Anca M
,
Nikolaus Schultz
3
Apr 29
Custom MutationMapper URL
Dear Niki, Thank you for your reply. This is really helpful. Kind wishes, Anca From: Nikolaus Schultz
unread,
Custom MutationMapper URL
Dear Niki, Thank you for your reply. This is really helpful. Kind wishes, Anca From: Nikolaus Schultz
Apr 29
Joseph Celidonio
, …
Tali Mazor
41
Apr 28
Variable Definition Confirmation
Hi Joe, If you hover your mouse over one of the group names, you'll see a pop-up like in the
unread,
Variable Definition Confirmation
Hi Joe, If you hover your mouse over one of the group names, you'll see a pop-up like in the
Apr 28
Joe Rich
,
Nikolaus Schultz
2
Apr 26
Exceeded LFS budget on datahub
Dear Joe, We apologize for the inconvenience… unfortunately, we have exceeded the monthly quota for
unread,
Exceeded LFS budget on datahub
Dear Joe, We apologize for the inconvenience… unfortunately, we have exceeded the monthly quota for
Apr 26
Mccann, Patrick
,
Schultz, Nikolaus
2
Apr 26
Download mutation data
Hi Pat, There is currently no way to download the full mutation data directly through cBioPortal, but
unread,
Download mutation data
Hi Pat, There is currently no way to download the full mutation data directly through cBioPortal, but
Apr 26
Harika Gannu
,
Benjamin Gross
7
Apr 23
cbioportal https
Thanks Benjamin for sharing more details. But, I already tried, it didn't work. On Thursday,
unread,
cbioportal https
Thanks Benjamin for sharing more details. But, I already tried, it didn't work. On Thursday,
Apr 23
Andrea Aquino Cruz
,
Priti Kumari
3
Apr 22
Request for TP53 Data
Hi Andrea, You can download all the data from the Datahub. Hope this helps, Priti On Tue, Apr 22,
unread,
Completed
Request for TP53 Data
Hi Andrea, You can download all the data from the Datahub. Hope this helps, Priti On Tue, Apr 22,
Apr 22
Lucas Wang
,
Priti Kumari
2
Apr 22
Mutation
Hi Lucas, You can download all mutations from the Datahub. We do not keep information on the
unread,
Completed
Mutation
Hi Lucas, You can download all mutations from the Datahub. We do not keep information on the
Apr 22
Ji Hen Lau
,
Priti Kumari
4
Apr 22
Issue with Discrete CNA Not Showing in Mutations Tab (CGHcall, sWGS)
Hi, I think I kind of sorted the issue out. It seems there's some internal data structure error
unread,
Completed
Issue with Discrete CNA Not Showing in Mutations Tab (CGHcall, sWGS)
Hi, I think I kind of sorted the issue out. It seems there's some internal data structure error
Apr 22
彭仲特
,
Priti Kumari
2
Apr 21
request data
Hi zhongte, Source data for TCGA studies are available in the Genomic Data Commons. They also have
unread,
Completed
request data
Hi zhongte, Source data for TCGA studies are available in the Genomic Data Commons. They also have
Apr 21
Allen, Destiney X
,
Nikolaus Schultz
3
Apr 21
Mutations tab annotations
Hi Niki, Yes, this was very helpful. Thank you! Regards, Destiney D. Allen, MB(ASCP) CM , Ph.D.
unread,
Mutations tab annotations
Hi Niki, Yes, this was very helpful. Thank you! Regards, Destiney D. Allen, MB(ASCP) CM , Ph.D.
Apr 21
MOLONEY, Kate (SALISBURY NHS FOUNDATION TRUST)
, …
Benjamin Gross
6
Apr 18
GENIE data access
Ok, let me know if you run into any more issues logging in. -Benjamin On Apr 18, 2025, at 5:21 PM,
unread,
Completed
GENIE data access
Ok, let me know if you run into any more issues logging in. -Benjamin On Apr 18, 2025, at 5:21 PM,
Apr 18
Harry Sun
,
de Bruijn, Ino
8
Apr 17
Why did I use Maven build cbioportal v6.1.0,6.2.0,6.2.1 and get failed ?
Ino, cBioportal v6.2.1 doesn't work after I completed "mvn -DskipTests clean install"
unread,
Why did I use Maven build cbioportal v6.1.0,6.2.0,6.2.1 and get failed ?
Ino, cBioportal v6.2.1 doesn't work after I completed "mvn -DskipTests clean install"
Apr 17