make all fails on Ubuntu 16. Appears to be some issue related to CXX11 ABI things.

[Colin Clausen]

I am getting this wall of errors after it compiled for a short time:

CXX/LD -o .build_release/tools/compute_image_mean.bin
.build_release/tools/compute_image_mean.o: In function `void std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_construct<char*>(char*, char*, std::forward_iterator_tag) [clone .isra.52]':
compute_image_mean.cpp:(.text.startup+0x88): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
.build_release/tools/compute_image_mean.o: In function `boost::system::system_error::what() const':
compute_image_mean.cpp:(.text._ZNK5boost6system12system_error4whatEv[_ZNK5boost6system12system_error4whatEv]+0x74): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)'
compute_image_mean.cpp:(.text._ZNK5boost6system12system_error4whatEv[_ZNK5boost6system12system_error4whatEv]+0xa1): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
compute_image_mean.cpp:(.text._ZNK5boost6system12system_error4whatEv[_ZNK5boost6system12system_error4whatEv]+0xe3): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace_aux(unsigned long, unsigned long, unsigned long, char)'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `vtable for std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char const*, unsigned long, unsigned long) const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long) const@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::runtime_error::runtime_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator+=(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::size() const@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `VTT for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator+=(char const*)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> >::_M_create(unsigned long&, unsigned long)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libboost_python.so: undefined reference to `std::range_error::range_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::~basic_string()@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(char const*, unsigned long)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_erase(unsigned long, unsigned long)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::basic_ostringstream(std::_Ios_Openmode)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >::str() const'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(char const*, unsigned long, std::allocator<char> const&)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace_aux(unsigned long, unsigned long, unsigned long, char)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `vtable for std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::basic_ostringstream(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::_Ios_Openmode)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator[](unsigned long) const@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `std::__cxx11::basic_stringstream<char, std::char_traits<char>, std::allocator<char> >::~basic_stringstream()@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::rfind(char, unsigned long) const@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::str() const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::data() const@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >::str(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
.build_release/lib/libcaffe.so: undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::replace(unsigned long, unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long, unsigned long)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char const*, unsigned long) const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::reserve(unsigned long)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::reserve(unsigned long)'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::resize(unsigned long, char)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `vtable for std::__cxx11::basic_stringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*, unsigned long)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::erase(unsigned long, unsigned long)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::length() const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char, unsigned long) const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::substr(unsigned long, unsigned long) const@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find_last_of(char const*, unsigned long, unsigned long) const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator[](unsigned long)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::basic_ostringstream(std::_Ios_Openmode)'
.build_release/lib/libcaffe.so: undefined reference to `std::domain_error::domain_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator=(char const*)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find_first_of(char const*, unsigned long, unsigned long) const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::~basic_ostringstream()@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(unsigned long, char)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >::_M_sync(char*, unsigned long, unsigned long)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(unsigned long, unsigned long, char const*) const'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::resize(unsigned long, char)'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::swap(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::basic_istream<char, std::char_traits<char> >& std::operator>><char, std::char_traits<char>, std::allocator<char> >(std::basic_istream<char, std::char_traits<char> >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&)'
/usr/lib/x86_64-linux-gnu/libboost_thread.so: undefined reference to `std::basic_istream<char, std::char_traits<char> >& std::getline<char, std::char_traits<char>, std::allocator<char> >(std::basic_istream<char, std::char_traits<char> >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, char)@GLIBCXX_3.4.21'
//usr/lib/x86_64-linux-gnu/libtbb.so.2: undefined reference to `std::length_error::length_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(unsigned long, unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator=(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::rfind(char, unsigned long) const'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find_first_not_of(char const*, unsigned long, unsigned long) const@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `VTT for std::__cxx11::basic_stringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)@GLIBCXX_3.4.20'
/usr/local/lib/libglog.so: undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::operator<< <char, std::char_traits<char>, std::allocator<char> >(std::basic_ostream<char, std::char_traits<char> >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::c_str() const@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(char const*)'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*)'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::begin()@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::replace(unsigned long, unsigned long, char const*)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libboost_thread.so: undefined reference to `std::runtime_error::runtime_error(std::runtime_error const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::replace(unsigned long, unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
//usr/lib/x86_64-linux-gnu/libIlmImf-2_2.so.22: undefined reference to `std::__cxx11::basic_stringstream<char, std::char_traits<char>, std::allocator<char> >::basic_stringstream(std::_Ios_Openmode)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(char const*)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::runtime_error::runtime_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
.build_release/lib/libcaffe.so: undefined reference to `vtable for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const@GLIBCXX_3.4.21'
//usr/lib/x86_64-linux-gnu/libtbb.so.2: undefined reference to `std::runtime_error::runtime_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::runtime_error::runtime_error(std::runtime_error const&)'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `vtable for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_construct(unsigned long, char)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::clear()@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::empty() const@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libleveldb.so: undefined reference to `__cxa_throw_bad_array_new_length@CXXABI_1.3.8'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::~basic_ostringstream()'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::swap(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&)'
/usr/lib/x86_64-linux-gnu/libboost_python.so: undefined reference to `std::invalid_argument::invalid_argument(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libboost_thread.so: undefined reference to `std::__cxx11::numpunct<char> const& std::use_facet<std::__cxx11::numpunct<char> >(std::locale const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(char const*, std::allocator<char> const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(unsigned long, char, std::allocator<char> const&)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libboost_thread.so: undefined reference to `std::runtime_error::runtime_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::basic_istream<char, std::char_traits<char> >& std::getline<char, std::char_traits<char>, std::allocator<char> >(std::basic_istream<char, std::char_traits<char> >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, char)'
.build_release/lib/libcaffe.so: undefined reference to `std::logic_error::logic_error(std::logic_error const&)'
/usr/lib/x86_64-linux-gnu/libopencv_core.so: undefined reference to `VTT for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::overflow_error::overflow_error(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string()@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator+=(char)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char, unsigned long) const'
.build_release/lib/libcaffe.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_construct(unsigned long, char)'
/usr/lib/x86_64-linux-gnu/libboost_python.so: undefined reference to `std::__cxx11::basic_string<wchar_t, std::char_traits<wchar_t>, std::allocator<wchar_t> >::_M_construct(unsigned long, wchar_t)@GLIBCXX_3.4.21'
//usr/lib/x86_64-linux-gnu/libtbb.so.2: undefined reference to `std::out_of_range::out_of_range(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::end()@GLIBCXX_3.4.21'
/usr/local/lib/libglog.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const@GLIBCXX_3.4.21'
/usr/lib/x86_64-linux-gnu/libprotobuf.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)@GLIBCXX_3.4.21'
.build_release/lib/libcaffe.so: undefined reference to `std::out_of_range::out_of_range(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
collect2: error: ld returned 1 exit status
Makefile:619: recipe for target '.build_release/tools/compute_image_mean.bin' failed
make: *** [.build_release/tools/compute_image_mean.bin] Error 1

From googleing around that seems to be related to this stuff about the dual ABI in C++ (https://gcc.gnu.org/onlinedocs/gcc-5.2.0/libstdc++/manual/manual/using_dual_abi.html).
I've however not been able to fix it. Using CUSTOM_CXX := g++ -D_GLIBCXX_USE_CXX11_ABI=0 changes where the errors are reported, but it still throws a long list of "undefined reference to .... cxx11..." out.

I am a little confuse how these errors come to be, it seems like pretty much all library files are affected. I also tried to compile using other g++ versions (5.4 and 4.9), but that did not help.
I've worked along this tutorial https://github.com/BVLC/caffe/wiki/Ubuntu-16.04-or-15.10-Installation-Guide and use cuda with cudnn and openblas. Changing the blas version to atlas didn't do anything. nvcc compiles things fine before these errors show up.

[Aakash Kaushal]

hi,

I am facing same issue. Did you able to solved?

/usr/lib/gcc-cross/arm-linux-gnueabi/5/../../../../arm-linux-gnueabi/bin/ld: warning: libm.so.6, needed by out/linux/arm/release/liboctbstack.so, not found (try using -rpath or -rpath-link)
/usr/lib/gcc-cross/arm-linux-gnueabi/5/../../../../arm-linux-gnueabi/bin/ld: warning: libstdc++.so.6, needed by out/linux/arm/release/liboc_logger.so, not found (try using -rpath or -rpath-link)
out/linux/arm/release/liboc_logger.so: undefined reference to `__gxx_personality_v0@CXXABI_1.3'
out/linux/arm/release/liboctbstack.so: undefined reference to `floor@GLIBC_2.4'
out/linux/arm/release/liboctbstack.so: undefined reference to `pow@GLIBC_2.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `__cxa_end_catch@CXXABI_1.3'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::ios_base::Init::~Init()@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::ostream::flush()@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >::str() const@GLIBCXX_3.4.21'
out/linux/arm/release/liboc_logger.so: undefined reference to `operator new(unsigned int)@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::ios_base::Init::Init()@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::~basic_ostringstream()@GLIBCXX_3.4.21'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::basic_ostringstream(std::_Ios_Openmode)@GLIBCXX_3.4.21'
out/linux/arm/release/liboc_logger.so: undefined reference to `__aeabi_atexit@CXXABI_ARM_1.3.3'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_dispose()@GLIBCXX_3.4.21'
out/linux/arm/release/liboc_logger.so: undefined reference to `operator delete(void*)@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::ostream::operator<<(int)@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*)@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::cout@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `__cxa_begin_catch@CXXABI_1.3'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char)@GLIBCXX_3.4'
out/linux/arm/release/liboc_logger.so: undefined reference to `std::__throw_system_error(int)@GLIBCXX_3.4.11'

collect2: error: ld returned 1 exit status

scons: *** [out/linux/arm/release/service/easy-setup/sampleapp/enrollee/linux/enrollee] Error 1
scons: building terminated because of errors.

[Colin Clausen]

Nope, I gave up on caffe for now, spending time with keras instead