Building Caffe per instructions does not work

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Shahad H.

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Feb 3, 2020, 4:44:31 AM2/3/20
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### Issue summary
[ 87%] Building CXX object tools/CMakeFiles/extract_features.dir/extract_features.cpp.o
[ 87%] Linking CXX executable compute_image_mean
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBAStrip@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `__cxa_init_primary_exception@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFIsTiled@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFWriteScanline@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `std::__exception_ptr::exception_ptr::exception_ptr(void*)@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFGetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFScanlineSize@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_generate@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedTile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBATile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFClose@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFRGBAImageOK@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFOpen@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedStrip@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetWarningHandler@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_unparse_lower@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetErrorHandler@LIBTIFF_4.0'
collect2: error: ld returned 1 exit status
tools/CMakeFiles/compute_image_mean.dir/build.make:134: recipe for target 'tools/compute_image_mean' failed
make[2]: *** [tools/compute_image_mean] Error 1
CMakeFiles/Makefile2:571: recipe for target 'tools/CMakeFiles/compute_image_mean.dir/all' failed
make[1]: *** [tools/CMakeFiles/compute_image_mean.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[ 89%] Linking CXX executable upgrade_net_proto_text
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBAStrip@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `__cxa_init_primary_exception@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFIsTiled@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFWriteScanline@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `std::__exception_ptr::exception_ptr::exception_ptr(void*)@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFGetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFScanlineSize@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_generate@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedTile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBATile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFClose@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFRGBAImageOK@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFOpen@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedStrip@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetWarningHandler@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_unparse_lower@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetErrorHandler@LIBTIFF_4.0'
collect2: error: ld returned 1 exit status
tools/CMakeFiles/upgrade_net_proto_text.dir/build.make:134: recipe for target 'tools/upgrade_net_proto_text' failed
make[2]: *** [tools/upgrade_net_proto_text] Error 1
CMakeFiles/Makefile2:533: recipe for target 'tools/CMakeFiles/upgrade_net_proto_text.dir/all' failed
make[1]: *** [tools/CMakeFiles/upgrade_net_proto_text.dir/all] Error 2
[ 89%] Linking CXX executable extract_features
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBAStrip@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `__cxa_init_primary_exception@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFIsTiled@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFWriteScanline@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `std::__exception_ptr::exception_ptr::exception_ptr(void*)@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFGetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFScanlineSize@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_generate@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedTile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBATile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFClose@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFRGBAImageOK@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFOpen@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedStrip@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetWarningHandler@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_unparse_lower@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetErrorHandler@LIBTIFF_4.0'
collect2: error: ld returned 1 exit status
tools/CMakeFiles/extract_features.dir/build.make:134: recipe for target 'tools/extract_features' failed
make[2]: *** [tools/extract_features] Error 1
CMakeFiles/Makefile2:495: recipe for target 'tools/CMakeFiles/extract_features.dir/all' failed
make[1]: *** [tools/CMakeFiles/extract_features.dir/all] Error 2
[ 90%] Linking CXX executable caffe
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBAStrip@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `__cxa_init_primary_exception@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFIsTiled@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFWriteScanline@LIBTIFF_4.0'
/home/systemseng/anaconda3/lib/libtbb.so.2: undefined reference to `std::__exception_ptr::exception_ptr::exception_ptr(void*)@CXXABI_1.3.11'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFGetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFScanlineSize@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_generate@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedTile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadRGBATile@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFClose@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFRGBAImageOK@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFOpen@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFReadEncodedStrip@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetField@LIBTIFF_4.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetWarningHandler@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libSM.so.6: undefined reference to `uuid_unparse_lower@UUID_1.0'
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to `TIFFSetErrorHandler@LIBTIFF_4.0'
collect2: error: ld returned 1 exit status
tools/CMakeFiles/caffe.bin.dir/build.make:134: recipe for target 'tools/caffe' failed
make[2]: *** [tools/caffe] Error 1
CMakeFiles/Makefile2:457: recipe for target 'tools/CMakeFiles/caffe.bin.dir/all' failed
make[1]: *** [tools/CMakeFiles/caffe.bin.dir/all] Error 2
Makefile:127: recipe for target 'all' failed
make: *** [all] Error 2

### Steps to reproduce
when executing make all -j4

### Tried solutions
sudo apt-get install libtiff5-dev

and
sudo apt-get install libopencv-dev


### System configuration

* Operating system: Ubuntu 16.04.6 LTS (Xenial Xerus)
* Compiler: gcc (Ubuntu 5.4.0-6ubuntu1~16.04.12) 5.4.0 20160609
* CUDA version (if applicable): 9.0
* CUDNN version (if applicable): 7.0.5
* BLAS: Atlas
* Python version (if using pycaffe): 3
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