Problems building pycaffe on MacOS 10.13

388 views
Skip to first unread message

Will Robertson

unread,
Sep 25, 2017, 9:06:59 PM9/25/17
to Caffe Users
I'm having some problems getting pycaffe to compile on MacOS 10.13. Builds of the Master branch compile just fine. 

Output from make pycaffe :


make pycaffe

LD -o .build_release/lib/libcaffe.so.1.0.0

clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]

Undefined symbols for architecture x86_64:

  "cv::imread(cv::String const&, int)", referenced from:

      caffe::WindowDataLayer<float>::load_batch(caffe::Batch<float>*) in window_data_layer.o

      caffe::WindowDataLayer<double>::load_batch(caffe::Batch<double>*) in window_data_layer.o

      caffe::ReadImageToCVMat(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, int, int, bool) in io.o

  "cv::imdecode(cv::_InputArray const&, int)", referenced from:

      caffe::DecodeDatumToCVMatNative(caffe::Datum const&) in io.o

      caffe::DecodeDatumToCVMat(caffe::Datum const&, bool) in io.o

  "cv::imencode(cv::String const&, cv::_InputArray const&, std::__1::vector<unsigned char, std::__1::allocator<unsigned char> >&, std::__1::vector<int, std::__1::allocator<int> > const&)", referenced from:

      caffe::ReadImageToDatum(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, int, int, int, bool, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, caffe::Datum*) in io.o

ld: symbol(s) not found for architecture x86_64

clang: error: linker command failed with exit code 1 (use -v to see invocation)

make: *** [.build_release/lib/libcaffe.so.1.0.0] Error 1



Output trying to build with cmake : 


/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:478:15: error: C++ requires a type specifier for all declarations

    char_type toupper(char_type __c) const

...

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:484:48: error: too many arguments provided to function-like macro invocation

    const char_type* toupper(char_type* __low, const char_type* __high) const

...

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:484:29: error: expected ';' at end of declaration list

    const char_type* toupper(char_type* __low, const char_type* __high) const

                            ^

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:496:48: error: too many arguments provided to function-like macro invocation

    const char_type* tolower(char_type* __low, const char_type* __high) const

...

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:480:27: error: use of undeclared identifier '__c'

        return do_toupper(__c);

                          ^

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:587:15: error: C++ requires a type specifier for all declarations

    char_type toupper(char_type __c) const

...

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:593:48: error: too many arguments provided to function-like macro invocation

    const char_type* toupper(char_type* __low, const char_type* __high) const

...

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:717:5: error: expected expression

    return use_facet<ctype<_CharT> >(__loc).is(ctype_base::space, __c);

    ^

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:718:2: error: expected ';' at end of declaration

}

 ^

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:739:21: error: too many arguments provided to function-like macro invocation

isupper(_CharT __c, const locale& __loc)

...

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:739:1: error: declaration conflicts with target of using declaration already in scope

...

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:741:5: error: expected expression

    return use_facet<ctype<_CharT> >(__loc).is(ctype_base::upper, __c);

    ^

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:742:2: error: expected ';' at end of declaration

}

 ^

/Library/Developer/CommandLineTools/usr/include/c++/v1/__locale:747:21: error: too many arguments provided to function-like macro invocation

islower(_CharT __c, const locale& __loc)

                    ^

/usr/include/python2.7/pyport.h:723:9: note: macro 'islower' defined here

#define islower(c) iswlower(btowc(c))

        ^

fatal error: too many errors emitted, stopping now [-ferror-limit=]

20 errors generated.

make[3]: *** [python/CMakeFiles/pycaffe.dir/caffe/_caffe.cpp.o] Error 1

make[2]: *** [python/CMakeFiles/pycaffe.dir/all] Error 2

make[1]: *** [python/CMakeFiles/pycaffe.dir/rule] Error 2

make: *** [pycaffe] Error 2


Any ideas? I've been looking for a while but haven't found any solutions. 

Thank you in advance for any help!!!

-William

Will Robertson

unread,
Sep 25, 2017, 9:10:03 PM9/25/17
to Caffe Users
 

Reposting errors as code snippets for readability

Vinodhkumar S

unread,
May 7, 2018, 1:53:17 AM5/7/18
to Caffe Users
Hi,
Did you find a fix for this issue?? 

Real_yangyang

unread,
May 8, 2018, 6:04:34 AM5/8/18
to Caffe Users
I have no idea about this issus. But I can provide my experience in build caffe on Mac 10.13


IMPORTANT:  I installed python2, python3 and openblas via homebrew. I didn't use system python interpreter.  and 

I use opencv3.4.1, which is complied by myself. Homebrew also provides pre-complied opencv3.4.1, which could be fine.

There is my Makefile.config. update your path if necessary.




# Contributions simplifying and improving our build system are welcome!

# cuDNN acceleration switch (uncomment to build with cuDNN).
# USE_CUDNN := 1

# CPU-only switch (uncomment to build without GPU support).
CPU_ONLY := 1

# uncomment to disable IO dependencies and corresponding data layers
# USE_OPENCV := 0
# USE_LEVELDB := 0
# USE_LMDB := 0

# uncomment to allow MDB_NOLOCK when reading LMDB files (only if necessary)
#   You should not set this flag if you will be reading LMDBs with any
#   possibility of simultaneous read and write
# ALLOW_LMDB_NOLOCK := 1

# Uncomment if you're using OpenCV 3
OPENCV_VERSION := 3

# To customize your choice of compiler, uncomment and set the following.
# N.B. the default for Linux is g++ and the default for OSX is clang++
# CUSTOM_CXX := g++

# CUDA directory contains bin/ and lib/ directories that we need.
CUDA_DIR := /usr/local/cuda
# On Ubuntu 14.04, if cuda tools are installed via
# "sudo apt-get install nvidia-cuda-toolkit" then use this instead:
# CUDA_DIR := /usr

# CUDA architecture setting: going with all of them.
# For CUDA < 6.0, comment the *_50 through *_61 lines for compatibility.
# For CUDA < 8.0, comment the *_60 and *_61 lines for compatibility.
# For CUDA >= 9.0, comment the *_20 and *_21 lines for compatibility.
CUDA_ARCH := -gencode arch=compute_20,code=sm_20 \
        -gencode arch=compute_20,code=sm_21 \
        -gencode arch=compute_30,code=sm_30 \
        -gencode arch=compute_35,code=sm_35 \
        -gencode arch=compute_50,code=sm_50 \
        -gencode arch=compute_52,code=sm_52 \
        -gencode arch=compute_60,code=sm_60 \
        -gencode arch=compute_61,code=sm_61 \
        -gencode arch=compute_61,code=compute_61

# BLAS choice:
# atlas for ATLAS (default)
# mkl for MKL
# open for OpenBlas
BLAS := open
# Custom (MKL/ATLAS/OpenBLAS) include and lib directories.
# Leave commented to accept the defaults for your choice of BLAS
# (which should work)!
# BLAS_INCLUDE := /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/Headers
# BLAS_LIB := /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A

# Homebrew puts openblas in a directory that is not on the standard search path
# BLAS_INCLUDE := $(shell brew --prefix openblas)/include
# BLAS_LIB := $(shell brew --prefix openblas)/lib

# This is required only if you will compile the matlab interface.
# MATLAB directory should contain the mex binary in /bin.
# MATLAB_DIR := /usr/local
MATLAB_DIR := /Applications/MATLAB_R2018a.app

# NOTE: this is required only if you will compile the python interface.
# We need to be able to find Python.h and numpy/arrayobject.h.
PYTHON_INCLUDE := /usr/local/Cellar/python@2/2.7.14_3/Frameworks/Python.framework/Headers \
                 /usr/local/Cellar/numpy/1.14.2/lib/python2.7/site-packages/numpy/core/include

# Anaconda Python distribution is quite popular. Include path:
# Verify anaconda location, sometimes it's in root.
# ANACONDA_HOME := $(HOME)/anaconda
# PYTHON_INCLUDE := $(ANACONDA_HOME)/include \
        # $(ANACONDA_HOME)/include/python2.7 \
        # $(ANACONDA_HOME)/lib/python2.7/site-packages/numpy/core/include

# Uncomment to use Python 3 (default is Python 2)
# PYTHON_LIBRARIES := boost_python3 python3.5m
# PYTHON_INCLUDE := /usr/include/python3.5m \
# /usr/lib/python3.5/dist-packages/numpy/core/include

# We need to be able to find libpythonX.X.so or .dylib.
PYTHON_LIB := /usr/local/Cellar/python@2/2.7.14_3/Frameworks/Python.framework/Versions/2.7/lib
# PYTHON_LIB := $(ANACONDA_HOME)/lib

# Homebrew installs numpy in a non standard path (keg only)
# PYTHON_INCLUDE += $(dir $(shell python -c 'import numpy.core; print(numpy.core.__file__)'))/include
# PYTHON_LIB += $(shell brew --prefix numpy)/lib

# Uncomment to support layers written in Python (will link against Python libs)
WITH_PYTHON_LAYER := 1

# Whatever else you find you need goes here.
INCLUDE_DIRS := $(PYTHON_INCLUDE) /usr/local/include /usr/local/Cellar/openblas/0.2.20_1/include
LIBRARY_DIRS := $(PYTHON_LIB) /usr/local/lib /usr/lib /usr/local/Cellar/openblas/0.2.20_1/lib

# If Homebrew is installed at a non standard location (for example your home directory) and you use it for general dependencies
# INCLUDE_DIRS += $(shell brew --prefix)/include
# LIBRARY_DIRS += $(shell brew --prefix)/lib

# NCCL acceleration switch (uncomment to build with NCCL)
# https://github.com/NVIDIA/nccl (last tested version: v1.2.3-1+cuda8.0)
# USE_NCCL := 1

# Uncomment to use `pkg-config` to specify OpenCV library paths.
# (Usually not necessary -- OpenCV libraries are normally installed in one of the above $LIBRARY_DIRS.)
# USE_PKG_CONFIG := 1

# N.B. both build and distribute dirs are cleared on `make clean`
BUILD_DIR := build
DISTRIBUTE_DIR := distribute

# Uncomment for debugging. Does not work on OSX due to https://github.com/BVLC/caffe/issues/171
# DEBUG := 1

# The ID of the GPU that 'make runtest' will use to run unit tests.
TEST_GPUID := 0

# enable pretty build (comment to see full commands)
Q ?= @

代码...


Reply all
Reply to author
Forward
0 new messages