What kind of phylogeny to use for Brownie?
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GY Zhang
Feb 9, 2012, 6:39:10 PM2/9/12
to brownie-users
Dear Brownie users and creators,
Brownie requires a time-calibrate phylogeny, but I read on O'meara'
website that it can also use a phylogeny with branch lengths (e.g., a
Maximum Likelihood). For almost all the papers that used Brownie I
read so far, time-calibrated phylogenies are used.
My question is: can I use a ML tree as an input tree for Brownie? I
have 229 tax on my tree. Thanks!
Guanyang (GY)
Entomology, UC Riverside
Brownie requires a time-calibrate phylogeny, but I read on O'meara'
website that it can also use a phylogeny with branch lengths (e.g., a
Maximum Likelihood). For almost all the papers that used Brownie I
read so far, time-calibrated phylogenies are used.
My question is: can I use a ML tree as an input tree for Brownie? I
have 229 tax on my tree. Thanks!
Guanyang (GY)
Entomology, UC Riverside
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