Hello,
I have made an update to v0.62.0. This version is now available on CRAN, as well, which can be downloaded simply by typing "install.packages('brainGraph')".
There is a new function, called "SPM", which replaces both "group.graph.diffs" and "permute.vertex". I am currently updating the User Guide (Chapter 5.12) to reflect these changes and show examples.
For specific changes, see on
Github.
Chris