Skip to first unread message
Chris Watson
May 3, 2017, 1:29:40 AM5/3/17
to brainGr...@googlegroups.com
Hello, I've made another quick (bugfix) update. "create_mats" will now correctly threshold the group-level matrices. Also I removed "clique number" from the list; this is because it takes much longer without it.
Chris
Chris Watson
May 5, 2017, 12:17:12 PM5/5/17
to brainGr...@googlegroups.com
Hi, I realized my last message was not very informative.
* In "create_mats", previously if "threshold.by='density'" was chosen, the group matrices ended up with a much higher density than specified with the "mat.thresh" argument. This has been fixed so that they are consistent.
* "set_brainGraph_attr" used to calculate a graph measure called the "clique number" (assigning the graph-level attribute "clique.num"). I removed this calculation from the function because it results in exceedingly high run-times particularly for graphs with more vertices (e.g., craddock200) and graphs with higher density.
Chris
Reply all
Reply to author
Forward
0 new messages