Pathway Commons version 14 is now online
Jeffrey Wong
Version 14 of Pathway Commons is now online!
Pathway Commons collects and integrates pathway and interaction data from public databases.
**Over 6 600 pathways -- Over 3.5 million interactions -- 23 data sources**
Access Pathway Commons via web apps, data downloads, web services and software tools designed for experimentalists, computational biologists and software developers.
New data source! Version 14 includes pathway data from Biofactoid, a web tool that enables authors to curate their papers in minutes. Share your research today at biofactoid.org
Search pathways by keyword or enter a gene list and access apps to view binary interactions and perform pathway enrichment analysis (apps.pathwaycommons.org). Cytoscape users can search Pathway Commons through the CyPath2 app.
Download the entire dataset (pathwaycommons.org/archives/) or use our web service (pathwaycommons.org/pc2/) to search and get data in Biological Pathway Exchange (BioPAX) and other popular formats. SIF web services provide rapid graph-theoretical queries of a binary interaction network (pathwaycommons.org/sifgraph/).
Learn more about pathway analysis of experimental data by visiting our Pathway Guide online textbook at pathwaycommons.org/guide/. Access software support and tools for BioPAX at biopax.org.
The Pathway Commons Team
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GitHub (github.com/PathwayCommons/)
Google Group (https://groups.google.com/forum/#!forum/pathway-commons-help/join)
Twitter (@PathwayCommons)