BioPAX discussion group

Since 5.0.1, we mostly fixed minor bugs, improved sbgn-converter and pattern implementations, and

The BioPAX Validator 4.0.0 Release. Auto-generated documentation (Maven site) Executable JARs can be

IANA has registered the following media type with me as a point of contact: Application/Vendor Tree -

Version 14 of Pathway Commons is now online! Pathway Commons collects and integrates pathway and

Well, turned out that "Fixed a bug that caused RDF/XML long output...", mentioned in the

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The 25th Annual Workshop on Computational Cell Biology will take place February 26-28, 2024 at the

Hello, fellow SBMLers, SBGNers, BioPAXers, BNGLers, and other modelers and developers, COMBINE in

Dear colleagues, Time is running out for tutorials/workshop proposals and financial aid applications!

Dear Computational Biologists, The "Computational Modeling in Biology" Network (COMBINE,

Yes, if you're a Python user, the pybiopax would be good to try as suggested by Quirin. Augustin

Dear BioPAX community, Does anyone have experience using BioPAX as a data standard for exchanging

Hi, Is there any example to better understand the potential of biopax data model? I'm interested

Hi BioPAX discussion group, I would like to extract only [the all] Xrefs from the BioPAX[s] in EcoCyc

Hi Dana - great question. What are you trying to accomplish with your use of ontologies? BioPAX was

Apologies for multiple postings... Call for Participation Lake Como Workshop and School on Cancer

Dear BioPAX community, The "Computational Modeling in Biology" Network (COMBINE) is an

Call for Workshop & Tutorial Proposals Proposal deadline: March 15. The International Conference

Dear colleagues, We're happy to announce that funds from the NSF are available to support US-

Dear BioPAX Community, We are excited to report that a major new release of VCell will be

Dear All, We have prepared a general survey on SBGN. We would be pleased if you could take a few

Regarding "Afterwards, I tried to use the version in java but I could not run it successfully,

Version 12 of Pathway Commons is now online! Pathway Commons collects and integrates pathway and

Dear all, The deadline for registration for COMBINE 2019 has passed since one week now. Thank you

Dear colleagues, Tomorrow is the registration deadline for our EU-STANDS4PM workshop in Heidelberg on

Dear colleagues, The abstract deadline for COMBINE 2019 (10th Computational Modeling in Biology

Dear colleagues, (apologies for possible multiple postings) We invite you to attend COMBINE 2019, the

Dear colleagues, We're happy to announce that funds from the NSF are available to support US-

Dear colleagues, (apologies for possible multiple postings) We invite you to attend COMBINE 2019, the

Apologies for the multiple postings… Note the early bird deadline of April 30th. Call for

Apologies for multiple postings Call for Participation Lake Como Workshop and School on Cancer

Version 11 of Pathway Commons is now online! Pathway Commons collects and integrates pathway and

Network Biology at ISMB 2019 in Basel, Tuesday July 23 rd The Network Biology track will focus on two