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gap4 does not run

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Damien

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Apr 25, 2006, 8:10:29 PM4/25/06
to bionet-soft...@magpie.bio.indiana.edu

I downloaded the Staden package and tried to use it. Unfortunately, the
program gap4 refuses to start (while othe programs like trev of pregap4
run fine).

When I try to start gap4, I get the following message:

invalid command name "load_alignment_matrix"
while executing
"load_alignment_matrix [keylget gap_defs ALIGNMENT.MATRIX_FILE]"
(file "/home/damien/BIN/staden-linux-1-6-0/lib/gap/gap.tcl" line 683)

I would appreciate if someone could tell me what to do. My OS is Kubuntu
Linux (Debian based).

Damien

Paul Donohue

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Apr 26, 2006, 11:22:55 AM4/26/06
to Damien, bionet-soft...@magpie.bio.indiana.edu

Damien

unread,
Apr 26, 2006, 8:28:02 PM4/26/06
to bionet-soft...@magpie.bio.indiana.edu

Thank you very much. Now it works great.

Damien

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