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MapQTL query on allele coding
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matth...@gmail.com
Sep 21, 2017, 4:06:09 PM9/21/17
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Hi,
We have imported a dataset using lmxll, nnxnp and hkxhk coding into MapQTL and correlated with phenotype. A colleague is trying to identify the genotypes with most effect on phenotype so she can subselect a smaller set of plants for a replicate trial. She has been shown how to identify the variance explained by each allele as mu_AB, mu_AC, mu_BC, mu_BD but how do these codes tie to the original allele coding?
Thanks for any help,
Matt
We have imported a dataset using lmxll, nnxnp and hkxhk coding into MapQTL and correlated with phenotype. A colleague is trying to identify the genotypes with most effect on phenotype so she can subselect a smaller set of plants for a replicate trial. She has been shown how to identify the variance explained by each allele as mu_AB, mu_AC, mu_BC, mu_BD but how do these codes tie to the original allele coding?
Thanks for any help,
Matt
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