Call for Applications: RevBayes NIMBioS Tutorial: Bayesian Inference of Phylogeny
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Catherine Crawley
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Jul 18, 2017, 3:15:59 PM7/18/17
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to mol-...@magpie.bio.indiana.edu
There's still time to apply for the RevBayes:
Bayesian Inference of Phylogeny Tutorial to be held at the
National Institute for Mathematical and Biological Synthesis
(NIMBioS) from August 7-11.
Objectives:
This course features RevBayes, an
exciting new program for Bayesian inference of phylogeny.
RevBayes is the successor to the popular program MrBayes,
but represents both a complete rewrite of the computer
code and a fundamental re-conception of phylogenetic
models. Specifically, RevBayes adopts a 'graphical-model'
framework that views all statistical models as comprised
of components that can be assembled in myriad
configurations to explore a corresponding array of
questions. This graphical-model approach to phylogenetic
inference provides effectively infinite flexibility.
Moreover, the graphical models are specified using an
R-like language, Rev, that empowers users to construct
arbitrarily complex phylogenetic models from simple
component parts (i.e. random variables, parameter
transformations and constants of different sorts).
This course is focused on phylogenetic trees and
comparative-phylogenetic methods, including
divergence-time estimation, morphological evolution,
lineage diversification, and historical biogeography.
Instruction is based on a combination of carefully
tailored lectures introducing the theoretical and
conceptual basis of each inference problem and hands-on
computer tutorials demonstrating how to explore these
questions using RevBayes (see http://revbayes.github.io/tutorials.html).
Participants are not assumed to have expertise in
phylogenetic theory; rather, we provide an accessible
introduction to Bayesian statistical inference and
stochastic models. We assume only that the students are
familiar with phylogenetic trees and their applications to
evolutionary biology. We therefore anticipate that this
course will be most suitable for senior PhD students, postdoctoral
researchers, and faculty who want to learn these
techniques.
Location:
NIMBioS at the University of Tennessee, Knoxville
Instructors:
Bastien Boussau, CNRS Researcher, Univ. of Lyon; Emma
Goldberg, Assistant Professor, Univ. of Minnesota; Tracy A.
Heath, Assistant Professor, Iowa State Univ.; Sebastian Höhna,
Postdoc, Univ. of California, Berkeley; John Huelsenbeck,
Professor, Univ. of California, Berkeley; Brian Moore,
Professor, Univ. of California, Davis; April M. Wright, Postdoc,
Iowa State Univ.
Registration
Fee: $500 for faculty and postdocs and $350 for students,
payable upon acceptance of application.
Participation in
NIMBioS tutorials is by application only. Individuals with a
strong interest in the topic are encouraged to apply, and
successful applicants will be notified within three weeks after
the application deadline.
The National
Institute for Mathematical and Biological Synthesis (NIMBioS) (http://www.nimbios.org)
brings together researchers from around the world to collaborate
across disciplinary boundaries to investigate solutions to basic
and applied problems in the life sciences. NIMBioS is sponsored
by the National Science Foundation, with additional support from
The University of Tennessee, Knoxville.