Call for Applications: RevBayes NIMBioS Tutorial: Bayesian Inference of Phylogeny
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Catherine Crawley
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Apr 4, 2017, 4:14:04 PM4/4/17
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to mol-...@magpie.bio.indiana.edu
The National Institute for
Mathematical and Biological Synthesis (NIMBioS) is now accepting
applications for its Tutorial, "RevBayes: Bayesian Inference of
Phylogeny," to be held August 7-11, 2017, at NIMBioS.
Objectives: This
course features RevBayes, an exciting new program for
Bayesian inference of phylogeny. RevBayes is the successor
to the popular program MrBayes, but represents both a
complete rewrite of the computer code and a fundamental
re-conception of phylogenetic models. Specifically, RevBayes
adopts a 'graphical-model' framework that views all
statistical models as comprised of components that can be
assembled in myriad configurations to explore a
corresponding array of questions. This graphical-model
approach to phylogenetic inference provides effectively
infinite flexibility. Moreover, the graphical models are
specified using an R-like language, Rev, that empowers users
to construct arbitrarily complex phylogenetic models from
simple component parts (i.e. random variables, parameter
transformations and constants of different sorts).
This course is focused on phylogenetic trees and
comparative-phylogenetic methods, including divergence-time
estimation, morphological evolution, lineage
diversification, and historical biogeography. Instruction is
based on a combination of carefully tailored lectures
introducing the theoretical and conceptual basis of each
inference problem and hands-on computer tutorials
demonstrating how to explore these questions using RevBayes
(see http://revbayes.github.io/tutorials.html).
Participants are not assumed to have expertise in
phylogenetic theory; rather, we provide an accessible
introduction to Bayesian statistical inference and
stochastic models. We assume only that the students are
familiar with phylogenetic trees and their applications to
evolutionary biology. We therefore anticipate that this
course will be most suitable for senior PhD students, postdoctoral
researchers, and faculty who want to learn these techniques.
Location:
NIMBioS at the University of Tennessee, Knoxville
Instructors: Bastien
Boussau, CNRS Researcher, Univ. of Lyon; Emma Goldberg, Assistant
Professor, Univ. of Minnesota; Tracy A. Heath, Assistant
Professor, Iowa State Univ.; Sebastian Höhna, Postdoc, Univ. of
California, Berkeley; John Huelsenbeck, Professor, Univ. of
California, Berkeley; Brian Moore, Professor, Univ. of California,
Davis; April M. Wright, Postdoc, Iowa State Univ.
For more information about the tutorial and a link to the online
application form, go to http://www.nimbios.org/tutorials/TT_revbayes Registration Fee: $500 for faculty and postdocs and
$350 for students, payable upon acceptance of application.
Participation in
NIMBioS tutorials is by application only. Individuals with a
strong interest in the topic are encouraged to apply, and
successful applicants will be notified within three weeks after
the application deadline.
Application
deadline: May 14, 2017 (applications received after the
deadline will be considered if space is available)
The National Institute for Mathematical and Biological Synthesis
(NIMBioS) (http://www.nimbios.org) brings together
researchers from around the world to collaborate across
disciplinary boundaries to investigate solutions to basic and
applied problems in the life sciences. NIMBioS is sponsored by the
National Science Foundation, with additional support from The
University of Tennessee, Knoxville.