Result file
Rakesh Bhowmick
Yannick De-Oliveira
Dear Rakesh,
As soon as you have created a new chromosome view with meta-QTLs, you can find a table in the analysis folder (named analysisName_trait_nbmetaQTLs_table.txt)
The last N columns of the table (N being the number of metaQTLs) gives you the predicted membership of each former QTL to each metaQTL. By this way you can know the number of each QTLs “participating” to a meta QTL.
In this table file I think you can find all information you need about your meta-QTLs. Concerning flanking markers, there is no automatic way to find them, the only solution I see at the moment is to zoom on your meta-QTLs and find manually flanking markers on your map.
Best regards
Yannick
De : biome...@googlegroups.com [mailto:biome...@googlegroups.com]
De la part de Rakesh Bhowmick
Envoyé : lundi 16 juillet 2018 20:34
À : biomercator <biome...@googlegroups.com>
Objet : [biomercator] Result file
Dear all,
From meta QTL result file how can we find that how many QTL has been combined in each meta QTL. How can we identify flanking markers for each QTL? How to calculate average PVE and LOD?
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