Genome version utilities

15 views

Skip to first unread message

Oussama BELAAROUCH

unread,

Oct 22, 2018, 7:59:46 PM10/22/18

to biomercator

Hello, i want use genome of Biomercator to retrieve genes flanking detected metaQTLs in Barley, but i don't know from where get needed appropriate input data: struct/func annotations + anchors file.

Please help

Yannick De-Oliveira

unread,

Oct 29, 2018, 5:52:33 AM10/29/18

to biome...@googlegroups.com

Dear Oussama,

I guess you can find all information on the Barley project site :

http://pgsb.helmholtz-muenchen.de/plant/barley/index.jsp

About the anchor file it is dependent of your genetic map. You need to have marker used to build your genetic map that you can locate on genome.

Best regards

Yannick

De : biome...@googlegroups.com [mailto:biome...@googlegroups.com] De la part de Oussama BELAAROUCH
Envoyé : mardi 23 octobre 2018 02:00
À : biomercator <biome...@googlegroups.com>
Objet : [biomercator] Genome version utilities

Hello, i want use genome of Biomercator to retrieve genes flanking detected metaQTLs in Barley, but i don't know from where get needed appropriate input data: struct/func annotations + anchors file.

Please help

--
You received this message because you are subscribed to the Google Groups "biomercator" group.
To unsubscribe from this group and stop receiving emails from it, send an email to biomercator...@googlegroups.com.
For more options, visit https://groups.google.com/d/optout.