Greetings of the day!!!
I have a small query on NCI60 cell line expression with specific target gene. I downloaded the NCI60 data from your downloads option. I have found there is variation in expression of 1007_s_at (probe) from the file I have downloaded and results displayed online Biogps, not only this specific gene mentioned but all the probes there is a variation from the file downloaded and displayed online. It would be great if you can help on this
Thanks in advance
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Thanks for your kind help. Much appreciated
I have two more questions regarding NCI60 cell lines data
Ø Is normalization required for this NCI60 or Is it ok if I consider only raw values given because Human U133A/GNF1H Gene Atlas is normalized with gcmra, so is it necessary to do normalization for NCI60 cell lines expression data
Ø Can you please send the information on cell lines as NCI60_sample_info.xls (92 KB) only contains information about 56 cell lines rest of them are missing. Ex: huh-7,hek293 cell lines doesn’t contain any information like cell type, tissue type, etc,. in sample_info excel sheet.
Thanks in advance!!
Thanks a ton for your kind reply with great explanation. Understood
Is normalization required for this NCI60 or Is it ok if I consider raw values because Human U133A/GNF1H Gene Atlas is normalized with gcmra.
Thanks in advance
From: G Tsueng [mailto:gts...@gmail.com]
Sent: Thursday, August 04, 2016 11:37 PM
Subject: Re: NCI60