"Unused Argument" error while plotting legends

[Utpal Smart]

Hi Nick,

It's me again. I have been able to run all the analyses without a hitch with my own data-set. However, I have hit a roadblock while plotting the legend; when I hit -   grid.table(keydf2, show.rownames=FALSE).
 I get the following error -

Error in gtable_table(d, name = "core", fg_params = theme$core$fg_params,  : 
  unused argument (show.rownames = FALSE)

I also get a similar error further down while trying to run : colors_list_for_states = mix_colors_for_states(colors_matrix, states_list_0based_index, exclude_null=(include_null_range==TRUE))
The error says : 
Error in mix_colors_for_states(colors_matrix, states_list_0based_index,  : 
  unused argument (exclude_null = (include_null_range == TRUE))

Having scanned through all the relevant posts on the group, I think its probably a library issue (?) but I have double checked and seem to have all the relevant libraries installed and active. Any thoughts?

Really appreciate your time...

cheers,

[Nick Matzke]

Hi Utpal,

On Fri, Feb 5, 2016 at 11:58 AM, Utpal Smart <utpal...@gmail.com> wrote:

Hi Nick,

It's me again. I have been able to run all the analyses without a hitch with my own data-set. However, I have hit a roadblock while plotting the legend; when I hit -   grid.table(keydf2, show.rownames=FALSE).
 I get the following error -

Error in gtable_table(d, name = "core", fg_params = theme$core$fg_params,  : 
  unused argument (show.rownames = FALSE)

I now get this error too. It looks like they've changed something in the grid.table function.  It works now, if you change from:

grid.table(keydf2, show.rownames=FALSE)

...to...

grid.table(keydf2, rows=NULL)

I've changed this now in the legend script at:

http://phylo.wikidot.com/example-biogeobears-scripts#legends

 

I also get a similar error further down while trying to run : colors_list_for_states = mix_colors_for_states(colors_matrix, states_list_0based_index, exclude_null=(include_null_range==TRUE))
The error says : 
Error in mix_colors_for_states(colors_matrix, states_list_0based_index,  : 
  unused argument (exclude_null = (include_null_range == TRUE))

Having scanned through all the relevant posts on the group, I think its probably a library issue (?) but I have double checked and seem to have all the relevant libraries installed and active. Any thoughts?

I don't see "exclude_null" in the legends example script here:

http://phylo.wikidot.com/example-biogeobears-scripts#legends

...so you are probably looking at some older script somewhere. I just ran the Psychotria script, and then the legend script at:

http://phylo.wikidot.com/example-biogeobears-scripts#legends

...and it works...

Cheers!

Nick

 

Really appreciate your time...

cheers,

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