Install from sources on ubuntu-linux

[jonslo]

Hi

Trying to install from sources on a linux server, but getting this error when I run the make -j 8 install! Any help?

pixbuf-2.0 -I/usr/include/libpng12 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include "-D__DATADIR=\"/usr/local/share/biogeme\""  -std=c++11 -O3 -g -O2 -c -o bioFilePackage.o bioFilePackage.cc
bioFilePackage.cc: In member function ‘void bioFilePackage::openFile(std::size_t)’:
bioFilePackage.cc:33:62: error: ‘gtk_show_uri_on_window’ was not declared in this scope
   gtk_show_uri_on_window(NULL,uri.c_str(),GDK_CURRENT_TIME,&g) ;
                                                              ^
Makefile:628: recipe for target 'bioFilePackage.o' failed
make[1]: *** [bioFilePackage.o] Error 1
make[1]: Leaving directory '/media/mcrops/09e8b692-665e-464e-9d90-0a8d4cba4e25/mcrops/core_tools/biogeme-2.6a/gtkgui'
Makefile:450: recipe for target 'install-recursive' failed
make: *** [install-recursive] Error 1

[jonslo]

Already asked and solved! Apologies for the re-post!!

[Cristian Domarchi]

Hi

I am experiencing exactly the same issue. Would you care to share how did you solve it?

Thanks in advance,

CDG

[michel.b...@epfl.ch]

It may happen with incompatible versions of gtkmm. Buold biogeme without the GUI: 

./configure --disable-gui

[Cristian Domarchi]

That was exactly the problem, I was able to install it properly with that correction.

Thank you very much! :)

CDG

[Michel Bierlaire]

It seems that you do not have the rights to install in the directory /usr/local/share/biogeme-2.5

Either change the target of the installation, or install it using “su”. 

On 13 Nov 2017, at 16:35, amin moeinaddini <a.moei...@gmail.com> wrote:

Hi Dear,

I've used "./configure --disable-gui" but i cant install it properly. The following error occurred.

Regards,
 
make[3]: Entering directory '/home/ma/libraries/pythonbiogeme'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/home/ma/libraries/pythonbiogeme'
make[2]: Leaving directory '/home/ma/libraries/pythonbiogeme'
make[1]: Leaving directory '/home/ma/libraries/pythonbiogeme'
Making install in tools/histograms
make[1]: Entering directory '/home/ma/tools/histograms'
make[2]: Entering directory '/home/ma/tools/histograms'
 /bin/mkdir -p '/usr/local/bin'
 /bin/mkdir -p '/usr/local/share/biogeme-2.5'
 /usr/bin/install -c -m 644 histogram.py generateHistogram.py generateWeightedHistogram.py '/usr/local/share/biogeme-2.5'
/usr/bin/install: cannot remove '/usr/local/share/biogeme-2.5/histogram.py': Permission denied
/usr/bin/install: cannot remove '/usr/local/share/biogeme-2.5/generateHistogram.py': Permission denied
/usr/bin/install: cannot remove '/usr/local/share/biogeme-2.5/generateWeightedHistogram.py': Permission denied
Makefile:389: recipe for target 'install-dist_pkgdatDATA' failed
make[2]: *** [install-dist_pkgdatDATA] Error 1
make[2]: *** Waiting for unfinished jobs....
 /usr/bin/install -c weightedhistogram histogram '/usr/local/bin'
/usr/bin/install: cannot remove '/usr/local/bin/weightedhistogram': Permission denied
/usr/bin/install: cannot remove '/usr/local/bin/histogram': Permission denied
Makefile:348: recipe for target 'install-binSCRIPTS' failed
make[2]: *** [install-binSCRIPTS] Error 1
make[2]: Leaving directory '/home/ma/tools/histograms'
Makefile:459: recipe for target 'install-am' failed
make[1]: *** [install-am] Error 2
make[1]: Leaving directory '/home/ma/tools/histograms'
Makefile:446: recipe for target 'install-recursive' failed



در دوشنبه 5 ژوئن 2017، ساعت 6:49:23 (UTC-4)، michel.b...@epfl.ch نوشته:

[Felipe Gonzalez]

Dear Michel,

I am trying to install biogeme in a server in which I do not have admin rights. I am calling this configure order:

./configure --prefix=/home/fagonza1/packages/biogeme --without-opopt --disable-gui

I have the following problem when trying to compile via the make command:

make[3]: Warning: File `Makefile' has modification time 5.5e+02 s in the future

/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..    -std=c++11 -O3 -g -O2 -c -o libutils_la-patAbsTime.lo `test -f 'patAbsTime.cc' || echo './'`patAbsTime.cc

libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -std=c++11 -O3 -g -O2 -c patAbsTime.cc  -fPIC -DPIC -o .libs/libutils_la-patAbsTime.o

cc1plus: error: unrecognized command line option "-std=c++11"

I tried to google about it and seems to be a problem in my compiler. I imagine that it cannot find c++ version 11, but I do not really know if it is that neither how to fix it.

If you could help I would really appreciate it.

Best wishes,

El lunes, 29 de mayo de 2017, 12:11:18 (UTC-4), jonslo escribió:

[Michel Bierlaire]

The option  -std=c++11 should be replaced by -std=gnu++11. We discovered that after the release of this version. 

Try 

./configure --prefix=/home/fagonza1/packages/biogeme --without-opopt --disable-gui CXXFLAGS=-std=gnu++11

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[Palaniappan S]

Hi,Im using ubuntu 16.04.Can you please explain how to install biogeme from step 1?

Would be helpful if you can forward the latest source to download from.

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[Bierlaire Michel]

The source is here http://biogeme.epfl.ch/distrib/biogeme-2.6a.tar.gz

The instructions are here: http://biogeme.epfl.ch/install.html#Sources

You need to make sure that the configure went well before proceeding with the make. 

[Palaniappan S]

That was helpful.Thank you so much!

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