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Feb 5, 2016, 12:55:59 AM2/5/16
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Frontiers Article AlertThursday, 4 February 2016
 
 

New articles in the field of

MICROBIOLOGY

FRONTIERS IN MICROBIOLOGY

In Chaotropy Lies Opportunity
Mark A. Lever

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY

The Gut Microbiota Reduces Colonization of the Mesenteric Lymph Nodes and IL-12-Independent IFN-γ Production During Salmonella Infection
María Fernández-Santoscoy, Ulf A. Wenzel, Ulf Yrlid, Susanna Cardell, Fredrik Bäckhed, and Mary Jo Wick
Chlamydia Infection Across Host Species Boundaries Promotes Distinct Sets of Transcribed Anti-Apoptotic Factors
Joshua E. Messinger, Emmalin Nelton, Colleen Feeney, and David C. Gondek
From the Outside-In: The Francisella tularensis Envelope and Virulence
Hannah M. Rowe and Jason F. Huntley
Salivary Antimicrobial Peptides in Early Detection of Periodontitis
Güliz N. Güncü, Dogukan Yilmaz, Eija Könönen, and Ulvi K. Gürsoy
Genetic Variations of PTPN2 and PTPN22: Role in the Pathogenesis of Type 1 Diabetes and Crohn's Disease
Robert C. Sharp, Muna Abdulrahim, Ebraheem S. Naser, and Saleh A. Naser
Salivary Cytoprotective Proteins in Inflammation and Resolution during Experimental Gingivitis—A Pilot Study
Guy M. Aboodi, Corneliu Sima, Eduardo B. Moffa, Karla T. B. Crosara, Yizhi Xiao, Walter L. Siqueira, and Michael Glogauer
Smooth to Rough Dissociation in Brucella: The Missing Link to Virulence
Marcos Mancilla

FRONTIERS IN MICROBIOLOGY
    Section “Antimicrobials, Resistance and Chemotherapy”

Klebsiella pneumoniae: Development of Carbapenem Resistance due to Acquisition of blaNDM-1 During Antimicrobial Therapy in Twin Infants with Pneumonia
Junying Zhu, Baixing Ding, Xiaogang Xu, Demei Zhu, Fan Yang, Hong Zhang, and Fupin Hu
Potential Use of Phenolic Acids as Anti-Candida Agents: A Review
Guilherme R. Teodoro, Kassapa Ellepola, Chaminda J. Seneviratne, and Cristiane Y. Koga-Ito
Modeling of the ComRS Signaling Pathway Reveals the Limiting Factors Controlling Competence in Streptococcus thermophilus
Laurie Haustenne, Georges Bastin, Pascal Hols, and Laetitia Fontaine
Screening of Pharmacologically Active Small Molecule Compounds Identifies Antifungal Agents Against Candida Biofilms
Takao Watamoto, Hiroshi Egusa, Takashi Sawase, and Hirofumi Yatani
Antibacterial Activity of a Novel Peptide-Modified Lysin Against Acinetobacter baumannii and Pseudomonas aeruginosa
Hang Yang, Mengyue Wang, Junping Yu, and Hongping Wei
Oleanolic Acid Induces the Type III Secretion System of Ralstonia solanacearum
Dousheng Wu, Wei Ding, Yong Zhang, Xuejiao Liu, and Liang Yang
Microbial Biotransformation to Obtain New Antifungals
Luiz F. Bianchini, Maria F. C. Arruda, Sergio R. Vieira, Patrícia M. S. Campelo, Ana M. T. Grégio, and Edvaldo A. R. Rosa
Comparative Genomics of Two ST 195 Carbapenem-Resistant Acinetobacter baumannii with Different Susceptibility to Polymyxin Revealed Underlying Resistance Mechanism
Soo-Sum Lean, Chew Chieng Yeo, Zarizal Suhaili, and Kwai-Lin Thong
Isolation and Genetic Analysis of Multidrug Resistant Bacteria from Diabetic Foot Ulcers
Shailesh K. Shahi and Ashok Kumar

FRONTIERS IN MICROBIOLOGY
    Section “Aquatic Microbiology”

Discovery, Prevalence, and Persistence of Novel Circular Single-Stranded DNA Viruses in the Ctenophores Mnemiopsis leidyi and Beroe ovata
Mya Breitbart, Bayleigh E. Benner, Parker E. Jernigan, Karyna Rosario, Laura M. Birsa, Rachel C. Harbeitner, Sidney Fulford, Carina Graham, Anna Walters, Dawn B. Goldsmith, Stella A. Berger, and Jens C. Nejstgaard
Nitrate Storage and Dissimilatory Nitrate Reduction by Eukaryotic Microbes
Anja Kamp, Signe Høgslund, Nils Risgaard-Petersen, and Peter Stief
The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria
Marjolaine Martin, Tristan Barbeyron, Renee Martin, Daniel Portetelle, Gurvan Michel, and Micheline Vandenbol
Unraveling the Functions of the Macroalgal Microbiome
Ravindra Pal Singh and C. R. K. Reddy

FRONTIERS IN MICROBIOLOGY
    Section “Evolutionary and Genomic Microbiology”

The Hematopoietic Organ: A Cornerstone for Wolbachia Propagation Between and Within Hosts
Christine Braquart-Varnier, Maryline Raimond, Gaëtan Mappa, Frédéric D. Chevalier, Winka Le Clec’h, and Mathieu Sicard
Gene Expression Profiling in Viable but Nonculturable (VBNC) Cells of Pseudomonas syringae pv. syringae
Olga A. Postnikova, Jonathan Shao, Norton M. Mock, Con J. Baker, and Lev G. Nemchinov
Comparative Gut Microbiota of 59 Neotropical Bird Species
Sarah M. Hird, César Sánchez, Bryan C. Carstens, and Robb T. Brumfield
Glycine Cleavage Powers Photoheterotrophic Growth of Chloroflexus aurantiacus in the Absence of H2
Lian He, Yaya Wang, Le You, Yadana Khin, Joseph K.-H. Tang, and Yinjie J. Tang
Analysis of Two Complementary Single-Gene Deletion Mutant Libraries of Salmonella Typhimurium in Intraperitoneal Infection of BALB/c Mice
Cecilia A. Silva-Valenzuela, Roberto C. Molina-Quiroz, Prerak Desai, Camila Valenzuela, Steffen Porwollik, Ming Zhao, Robert M. Hoffman, Helene Andrews-Polymenis, Inés Contreras, Carlos A. Santiviago, and Michael McClelland
Microsatellites in Pursuit of Microbial Genome Evolution
Abdullah F. Saeed, Rongzhi Wang, and Shihua Wang

FRONTIERS IN MICROBIOLOGY
    Section “Extreme Microbiology”

Key Factors Influencing Rates of Heterotrophic Sulfate Reduction in Active Seafloor Hydrothermal Massive Sulfide Deposits
Kiana L. Frank, Karyn L. Rogers, Daniel R. Rogers, David T. Johnston, and Peter R. Girguis
Bacterial Composition and Survival on Sahara Dust Particles Transported to the European Alps
Marco Meola, Anna Lazzaro, and Josef Zeyer
Microbial Communities on Seafloor Basalts at Dorado Outcrop Reflect Level of Alteration and Highlight Global Lithic Clades
Michael D. Lee, Nathan G. Walworth, Jason B. Sylvan, Katrina J. Edwards, and Beth N. Orcutt
Rapid Reactivation of Cyanobacterial Photosynthesis and Migration upon Rehydration of Desiccated Marine Microbial Mats
Arjun Chennu, Alistair Grinham, Lubos Polerecky, Dirk de Beer, and Mohammad A. A. Al-Najjar

FRONTIERS IN MICROBIOLOGY
    Section “Food Microbiology”

The Prevalence and Control of Bacillus and Related Spore-Forming Bacteria in the Dairy Industry
Nidhi Gopal, Colin Hill, Paul R. Ross, Tom P. Beresford, Mark A. Fenelon, and Paul D. Cotter
Engineering Bacterial Surface Displayed Human Norovirus Capsid Proteins: A Novel System to Explore Interaction Between Norovirus and Ligands
Mengya Niu, Qianqian Yu, Peng Tian, Zhiyong Gao, Dapeng Wang, and Xianming Shi
Editorial: Exploring Bacterial Colonies in Solid Foods or Model Foods Using Non-Destructive Techniques
Sophie Jeanson and Anne Thierry
DNase-Sensitive and -Resistant Modes of Biofilm Formation by Listeria monocytogenes
Marion Zetzmann, Mira Okshevsky, Jasmin Endres, Anne Sedlag, Nelly Caccia, Marc Auchter, Mark S. Waidmann, Mickaël Desvaux, Rikke L. Meyer, and Christian U. Riedel

FRONTIERS IN MICROBIOLOGY
    Section “Fungi and Their Interactions”

Fungal Melanin: What do We Know About Structure?
Joshua D. Nosanchuk, Ruth E. Stark, and Arturo Casadevall
Genes of the de novo and Salvage Biosynthesis Pathways of Vitamin B6 are Regulated under Oxidative Stress in the Plant Pathogen Rhizoctonia solani
Jamil Samsatly, Rony Chamoun, Emile Gluck-Thaler, and Suha Jabaji

FRONTIERS IN MICROBIOLOGY
    Section “Infectious Diseases”

Rapid Detection of K1 Hypervirulent Klebsiella pneumoniae by MALDI-TOF MS
Yonglu Huang, Jiaping Li, Danxia Gu, Ying Fang, Edward W. Chan, Sheng Chen, and Rong Zhang
Atorvastatin Reduces the Survival of Candida albicans-Infected BALB/c Mice
Elias A. Rahal, Wissam N. Constantin, Nabil Zeidan, and Alexander M. Abdelnoor
Dynamics of Bacterial Community Composition in the Malaria Mosquito's Epithelia
Majoline T. Tchioffo, Anne Boissière, Luc Abate, Sandrine E. Nsango, Albert N. Bayibéki, Parfait H. Awono-Ambéné, Richard Christen, Geoffrey Gimonneau, and Isabelle Morlais

FRONTIERS IN MICROBIOLOGY
    Section “Microbial Immunology”

Complement Activation in Placental Malaria
Chloe R. McDonald, Vanessa Tran, and Kevin C. Kain
Transposon Mutagenesis Identifies Novel Genes Associated with Staphylococcus aureus Persister Formation
Wenjie Wang, Jiazhen Chen, Gang Chen, Xin Du, Peng Cui, Jing Wu, Jing Zhao, Nan Wu, Wenhong Zhang, Min Li, and Ying Zhang
Frontiers in Microbiology ranks 3rd on impact factor among open-access jounrals.

FRONTIERS IN MICROBIOLOGY
    Section “Microbial Immunology” (Continued)

Oral Administration of Heat-Killed Mycobacterium manresensis Delays Progression toward Active Tuberculosis in C3HeB/FeJ Mice
Paula Cardona, Elena Marzo-Escartín, Gustavo Tapia, Jorge Díaz, Vanessa García, Ismael Varela, Cristina Vilaplana, and Pere-Joan Cardona

FRONTIERS IN MICROBIOLOGY
    Section “Microbial Physiology and Metabolism”

gbtools: Interactive Visualization of Metagenome Bins in R
Brandon K. B. Seah and Harald R. Gruber-Vodicka
A Metagenomics-Based Metabolic Model of Nitrate-Dependent Anaerobic Oxidation of Methane by Methanoperedens-Like Archaea
Arslan Arshad, Daan R. Speth, Rob M. de Graaf, Huub J. M. Op den Camp, Mike S. M. Jetten, and Cornelia U. Welte
Type III Methyltransferase M.NgoAX from Neisseria gonorrhoeae FA1090 Regulates Biofilm Formation and Interactions with Human Cells
Agnieszka Kwiatek, Agnieszka Mrozek, Pawel Bacal, Andrzej Piekarowicz, and Monika Adamczyk-Popławska
Modulation of Biofilm Exopolysaccharides by the Streptococcus mutans vicX Gene
Lei Lei, Yingming Yang, Mengying Mao, Hong Li, Meng Li, Yan Yang, Jiaxin Yin, and Tao Hu
Construction of a Super-Competent Bacillus subtilis 168 Using the PmtlA-comKS Inducible Cassette
Regine Rahmer, Kambiz Morabbi Heravi, and Josef Altenbuchner
Plasticity of Streptomyces coelicolor Membrane Composition Under Different Growth Conditions and During Development
Mario Sandoval-Calderón, Don D. Nguyen, Clifford A. Kapono, Paul Herron, Pieter C. Dorrestein, and Christian Sohlenkamp
Infiltration of Matrix-Non-producers Weakens the Salmonella Biofilm and Impairs Its Antimicrobial Tolerance and Pathogenicity
Chakravarthy S. Srinandan, Monalisha Elango, Divya P. Gnanadhas, and Dipshikha Chakravortty
Genomic Reconstruction of an Uncultured Hydrothermal Vent Gammaproteobacterial Methanotroph (Family Methylothermaceae) Indicates Multiple Adaptations to Oxygen Limitation
Connor T. Skennerton, Lewis M. Ward, Alice Michel, Kyle Metcalfe, Chanel Valiente, Sean Mullin, Ken Y. Chan, Viviana Gradinaru, and Victoria J. Orphan
Importance of the Two Dissimilatory (Nar) Nitrate Reductases in the Growth and Nitrate Reduction of the Methylotrophic Marine Bacterium Methylophaga nitratireducenticrescens JAM1
Florian Mauffrey, Christine Martineau, and Richard Villemur
Probing an Interfacial Surface in the Cyanide Dihydratase from Bacillus pumilus, A Spiral Forming Nitrilase
Jason M. Park, Andani Mulelu, B. Trevor Sewell, and Michael J. Benedik
Variability of rRNA Operon Copy Number and Growth Rate Dynamics of Bacillus Isolated from an Extremely Oligotrophic Aquatic Ecosystem
Jorge A. Valdivia-Anistro, Luis E. Eguiarte-Fruns, Gabriela Delgado-Sapién, Pedro Márquez-Zacarías, Jaime Gasca-Pineda, Jennifer Learned, James J. Elser, Gabriela Olmedo-Alvarez, and Valeria Souza

FRONTIERS IN MICROBIOLOGY
    Section “Microbiological Chemistry and Geomicrobiology”

The Effect of Natural Organic Matter on Mercury Methylation by Desulfobulbus propionicus 1pr3
John W. Moreau, Caitlin M. Gionfriddo, David P. Krabbenhoft, Jacob M. Ogorek, John F. DeWild, George R. Aiken, and Eric E. Roden
Groundwater Isolation Governs Chemistry and Microbial Community Structure along Hydrologic Flowpaths
Sarah Ben Maamar, Luc Aquilina, Achim Quaiser, Hélène Pauwels, Sophie Michon-Coudouel, Virginie Vergnaud-Ayraud, Thierry Labasque, Clément Roques, Benjamin W. Abbott, and Alexis Dufresne
Sulfur Isotope Effects of Dissimilatory Sulfite Reductase
William D. Leavitt, Alexander S. Bradley, André A. Santos, Inês A. C. Pereira, and David T. Johnston

FRONTIERS IN MICROBIOLOGY
    Section “Microbiotechnology, Ecotoxicology and Bioremediation”

Role of Penicillium chrysogenum XJ-1 in the Detoxification and Bioremediation of Cadmium
Xingjian Xu, Lu Xia, Wei Zhu, Zheyi Zhang, Qiaoyun Huang, and Wenli Chen
Phosphorus Recycling from an Unexplored Source by Polyphosphate Accumulating Microalgae and Cyanobacteria—A Step to Phosphorus Security in Agriculture
Chandan Mukherjee, Rajojit Chowdhury, and Krishna Ray
Metabolic Engineering and Comparative Performance Studies of Synechocystis sp. PCC 6803 Strains for Effective Utilization of Xylose
Saurabh Ranade, Yan Zhang, Mecit Kaplan, Waqar Majeed, and Qingfang He

FRONTIERS IN MICROBIOLOGY
    Section “Plant Biotic Interactions”

Volatiles in Inter-Specific Bacterial Interactions
Olaf Tyc, Hans Zweers, Wietse de Boer, and Paolina Garbeva
Transplanting Soil Microbiomes Leads to Lasting Effects on Willow Growth, but not on the Rhizosphere Microbiome
Etienne Yergeau, Terrence H. Bell, Julie Champagne, Christine Maynard, Stacie Tardif, Julien Tremblay, and Charles W. Greer
Endophytic Cultivable Bacteria of the Metal Bioaccumulator Spartina maritima Improve Plant Growth but Not Metal Uptake in Polluted Marshes Soils
Jennifer Mesa, Enrique Mateos-Naranjo, Miguel A. Caviedes, Susana Redondo-Gómez, Eloisa Pajuelo, and Ignacio D. Rodríguez-Llorente
Airborne Bacterial Interactions: Functions Out of Thin Air?
Bianca Audrain, Sylvie Létoffé, and Jean-Marc Ghigo
Microbial Small Talk: Volatiles in Fungal–Bacterial Interactions
Ruth Schmidt, Desalegn W. Etalo, Victor de Jager, Saskia Gerards, Hans Zweers, Wietse de Boer, and Paolina Garbeva

FRONTIERS IN MICROBIOLOGY
    Section “Systems Microbiology”

Effects of Adaptation of In vitro Rumen Culture to Garlic Oil, Nitrate, and Saponin and Their Combinations on Methanogenesis, Fermentation, and Abundances and Diversity of Microbial Populations
Amlan K. Patra and Zhongtang Yu
The Phytohormone Ethylene Enhances Cellulose Production, Regulates CRP/FNRKx Transcription and Causes Differential Gene Expression within the Bacterial Cellulose Synthesis Operon of Komagataeibacter (Gluconacetobacter) xylinus ATCC 53582
Richard V. Augimeri and Janice L. Strap
A Plasmid-Transposon Hybrid Mutagenesis System Effective in a Broad Range of Enterobacteria
Rita Monson, Debra S. Smith, Miguel A. Matilla, Kevin Roberts, Elizabeth Richardson, Alison Drew, Neil Williamson, Josh Ramsay, Martin Welch, and George P. C. Salmond

FRONTIERS IN MICROBIOLOGY
    Section “Terrestrial Microbiology”

Methods for Baiting and Enriching Fungus-Feeding (Mycophagous) Rhizosphere Bacteria
Max-Bernhard Ballhausen, Johannes A. van Veen, Maria P. J. Hundscheid, and Wietse de Boer
Potential Activity, Size, and Structure of Sulfate-Reducing Microbial Communities in an Exposed, Grazed and a Sheltered, Non-Grazed Mangrove Stand at the Red Sea Coast
Melike Balk, Joost A. Keuskamp, and Hendrikus J. Laanbroek
Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon
Acacio A. Navarrete, Andressa M. Venturini, Kyle M. Meyer, Ann M. Klein, James M. Tiedje, Brendan J. M. Bohannan, Klaus Nüsslein, Siu M. Tsai, and Jorge L. M. Rodrigues
Tree Plantation Systems Influence Nitrogen Retention and the Abundance of Nitrogen Functional Genes in the Solomon Islands
Frédérique Reverchon, Shahla H. Bai, Xian Liu, and Timothy J. Blumfield
Recurrence and Frequency of Disturbance have Cumulative Effect on Methanotrophic Activity, Abundance, and Community Structure
Adrian Ho, Erik van den Brink, Andreas Reim, Sascha M. B. Krause, and Paul L. E. Bodelier

FRONTIERS IN MICROBIOLOGY
    Section “Virology”

Border Disease Virus: An Exceptional Driver of Chamois Populations Among Other Threats
Emmanuel Serrano, Andreu Colom-Cadena, Emmanuelle Gilot-Fromont, Mathieu Garel, Oscar Cabezón, Roser Velarde, Laura Fernández-Sirera, Xavier Fernández-Aguilar, Rosa Rosell, Santiago Lavín, and Ignasi Marco
Acquisition of Full-Length Viral Helicase Domains by Insect Retrotransposon-Encoded Polypeptides
Ekaterina Lazareva, Alexander Lezzhov, Nikita Vassetzky, Andrey Solovyev, and Sergey Morozov
Alcohol and Cannabinoids Differentially Affect HIV Infection and Function of Human Monocyte-Derived Dendritic Cells (MDDC)
Marisela Agudelo, Gloria Figueroa, Adriana Yndart, Gianna Casteleiro, Karla Muñoz, Thangavel Samikkannu, Venkata Atluri, and Madhavan P. Nair
Evolution of 2014/15 H3N2 Influenza Viruses Circulating in US: Consequences for Vaccine Effectiveness and Possible New Pandemic
Veljko Veljkovic, Slobodan Paessler, Sanja Glisic, Jelena Prljic, Vladimir R. Perovic, Nevena Veljkovic, and Matthew Scotch
Commentary: Methamphetamine mediates immune dysregulation in a murine model of chronic viral infection
Jennifer M. Loftis

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