Re: New Articles From BMC Bioinformatics

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BMC Bioinformatics

The following new articles have just been published in BMC Bioinformatics RESEARCH Systematic and benchmarking studies of pipelines for mammal WGBS data in the novel NGS platform Qun-ting Lin, Wei Yang … Lei Sun BMC Bioinformatics 2023, 24:33 | Published on: 31 January 2023 Full Text | PDF RESEARCH PP-DDP: a privacy-preserving outsourcing framework for solving the double digest problem Jingwen Suo, Lize Gu … Licheng Wang BMC Bioinformatics 2023, 24:34 | Published on: 31 January 2023 Full Text | PDF SOFTWARE GENTLE: a novel bioinformatics tool for generating features and building classifiers from T cell repertoire cancer data Dhiego Souto Andrade, Patrick Terrematte … Sol Efroni BMC Bioinformatics 2023, 24:32 | Published on: 30 January 2023 Full Text | PDF RESEARCH DeepSelectNet: deep neural network based selective sequencing for oxford nanopore sequencing Anjana Senanayake, Hasindu Gamaarachchi … Roshan Ragel BMC Bioinformatics 2023, 24:31 | Published on: 28 January 2023 Full Text | PDF SOFTWARE Single-cell spatial explorer: easy exploration of spatial and multimodal transcriptomics Frédéric Pont, Juan Pablo Cerapio … Marie Tosolini BMC Bioinformatics 2023, 24:30 | Published on: 27 January 2023 Full Text | PDF RESEARCH Ion-pumping microbial rhodopsin protein classification by machine learning approach Muthu Krishnan Selvaraj, Anamika Thakur … Senthil Prasad Elumalai BMC Bioinformatics 2023, 24:29 | Published on: 27 January 2023 Full Text | PDF METHODOLOGY Detecting genomic deletions from high-throughput sequence data with unsupervised learning Xin Li and Yufeng Wu BMC Bioinformatics 2023, 23:568 | Published on: 27 January 2023 Full Text | PDF SOFTWARE Gdaphen, R pipeline to identify the most important qualitative and quantitative predictor variables from phenotypic data Maria del Mar Muñiz Moreno, Claire Gavériaux-Ruff and Yann Herault BMC Bioinformatics 2023, 24:28 | Published on: 26 January 2023 Full Text | PDF SOFTWARE nf-core/circrna: a portable workflow for the quantification, miRNA target prediction and differential expression analysis of circular RNAs Barry Digby, Stephen P. Finn and Pilib Ó Broin BMC Bioinformatics 2023, 24:27 | Published on: 24 January 2023 Full Text | PDF RESEARCH Effective matrix designs for COVID-19 group testing David Brust and Johannes J. Brust BMC Bioinformatics 2023, 24:26 | Published on: 24 January 2023 Full Text | PDF RESEARCH Identification of prognostic and predictive biomarkers in high-dimensional data with PPLasso Wencan Zhu, Céline Lévy-Leduc and Nils Ternès BMC Bioinformatics 2023, 24:25 | Published on: 23 January 2023 Full Text | PDF SOFTWARE BADASS: BActeriocin-Diversity ASsessment Software Sávio S. Costa, Gislenne da Silva Moia … Adonney Allan de Oliveira Veras BMC Bioinformatics 2023, 24:24 | Published on: 20 January 2023 Full Text | PDF RESEARCH ARTICLE SVhound: detection of regions that harbor yet undetected structural variation Luis F. Paulin, Muthuswamy Raveendran … Fritz J. Sedlazeck BMC Bioinformatics 2023, 24:23 | Published on: 20 January 2023 Full Text | PDF RESEARCH Accommodating multiple potential normalizations in microbiome associations studies Hoseung Song, Wodan Ling … Michael C. Wu BMC Bioinformatics 2023, 24:22 | Published on: 19 January 2023 Full Text | PDF RESEARCH MultiScale-CNN-4mCPred: a multi-scale CNN and adaptive embedding-based method for mouse genome DNA N4-methylcytosine prediction Peijie Zheng, Guiyang Zhang … Guohua Huang BMC Bioinformatics 2023, 24:21 | Published on: 18 January 2023 Full Text | PDF RESEARCH Genomic and immunogenomic analysis of three prognostic signature genes in LUAD Hai-Ming Feng, Ye Zhao … Bin Li BMC Bioinformatics 2023, 24:19 | Published on: 17 January 2023 Full Text | PDF RESEARCH PDA-PRGCN: identification of Piwi-interacting RNA-disease associations through subgraph projection and residual scaling-based feature augmentation Ping Zhang, Weicheng Sun … Li Li BMC Bioinformatics 2023, 24:18 | Published on: 17 January 2023 Full Text | PDF RESEARCH A signature of immune-related genes correlating with clinical prognosis and immune microenvironment in sepsis Zhong-Hua Chen, Wen-Yuan Zhang … Xiang-Ming Fang BMC Bioinformatics 2023, 24:20 | Published on: 17 January 2023 Full Text | PDF RESEARCH Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization Carolina Peixoto, Marta B. Lopes … Susana Vinga BMC Bioinformatics 2023, 24:17 | Published on: 16 January 2023 Full Text | PDF RESEARCH Identifying cancer driver genes based on multi-view heterogeneous graph convolutional network and self-attention mechanism Wei Peng, Rong Wu … Ning Yu