[biocaml/biocaml] 6d2fe9: Modernize .gitignore

[Richard Davison]

Branch: refs/heads/modernize
Home: https://github.com/biocaml/biocaml
Commit: 6d2fe96ee44253de551c718a031be5141149e896
https://github.com/biocaml/biocaml/commit/6d2fe96ee44253de551c718a031be5141149e896
Author: Richard Davison <rn...@solvuu.com>
Date: 2022-08-30 (Tue, 30 Aug 2022)

Changed paths:
M .gitignore

Log Message:
-----------
Modernize .gitignore


Commit: 1068b5958871ea7e3cfec147bfd284b17d277bcd
https://github.com/biocaml/biocaml/commit/1068b5958871ea7e3cfec147bfd284b17d277bcd
Author: Richard Davison <rn...@solvuu.com>
Date: 2022-08-30 (Tue, 30 Aug 2022)

Changed paths:
A .nvmrc
M Makefile
M lib/unix/dune
A package.json

Log Message:
-----------
Add esy based development workflow


Commit: 7f2ad2e63a26d04cbe8b09993c0fb120ce8f32bc
https://github.com/biocaml/biocaml/commit/7f2ad2e63a26d04cbe8b09993c0fb120ce8f32bc
Author: Richard Davison <rn...@solvuu.com>
Date: 2022-08-30 (Tue, 30 Aug 2022)

Changed paths:
A .vscode/extensions.json
A .vscode/settings.json

Log Message:
-----------
Add VS Code config


Commit: 1072c12d4c7a5863415558cb8dcd7b9886640645
https://github.com/biocaml/biocaml/commit/1072c12d4c7a5863415558cb8dcd7b9886640645
Author: Richard Davison <rn...@solvuu.com>
Date: 2022-08-30 (Tue, 30 Aug 2022)

Changed paths:
A esy.lock/.gitattributes
A esy.lock/.gitignore
A esy.lock/index.json
A esy.lock/opam/angstrom.0.15.0/opam
A esy.lock/opam/astring.0.8.5/opam
A esy.lock/opam/async.v0.15.0/opam
A esy.lock/opam/async_kernel.v0.15.0/opam
A esy.lock/opam/async_rpc_kernel.v0.15.0/opam
A esy.lock/opam/async_unix.v0.15.0/opam
A esy.lock/opam/base-bigarray.base/opam
A esy.lock/opam/base-bytes.base/opam
A esy.lock/opam/base-threads.base/opam
A esy.lock/opam/base-unix.base/opam
A esy.lock/opam/base.v0.15.0/opam
A esy.lock/opam/base64.3.5.0/opam
A esy.lock/opam/base_bigstring.v0.15.0/opam
A esy.lock/opam/base_quickcheck.v0.15.0/opam
A esy.lock/opam/bigstringaf.0.9.0/opam
A esy.lock/opam/bin_prot.v0.15.0/opam
A esy.lock/opam/camlp-streams.5.0.1/opam
A esy.lock/opam/camlzip.1.11/opam
A esy.lock/opam/cfstream.1.3.1/opam
A esy.lock/opam/chrome-trace.3.4.1/opam
A esy.lock/opam/cmdliner.1.1.1/opam
A esy.lock/opam/conf-m4.1/opam
A esy.lock/opam/conf-pkg-config.2/opam
A esy.lock/opam/conf-zlib.1/opam
A esy.lock/opam/core.v0.15.0/opam
A esy.lock/opam/core_kernel.v0.15.0/opam
A esy.lock/opam/core_unix.v0.15.0/opam
A esy.lock/opam/cppo.1.6.9/opam
A esy.lock/opam/csexp.1.5.1/opam
A esy.lock/opam/dune-build-info.3.4.1/opam
A esy.lock/opam/dune-configurator.3.4.1/opam
A esy.lock/opam/dune-rpc.3.4.1/opam
A esy.lock/opam/dune.3.4.1/opam
A esy.lock/opam/dyn.3.4.1/opam
A esy.lock/opam/either.1.0.0/opam
A esy.lock/opam/expect_test_helpers_core.v0.15.0/opam
A esy.lock/opam/fiber.3.4.1/opam
A esy.lock/opam/fieldslib.v0.15.0/opam
A esy.lock/opam/fix.20220121/opam
A esy.lock/opam/fpath.0.7.3/opam
A esy.lock/opam/int_repr.v0.15.0/opam
A esy.lock/opam/jane-street-headers.v0.15.0/opam
A esy.lock/opam/jst-config.v0.15.1/opam
A esy.lock/opam/lwt.5.6.1/opam
A esy.lock/opam/menhir.20220210/opam
A esy.lock/opam/menhirLib.20220210/opam
A esy.lock/opam/menhirSdk.20220210/opam
A esy.lock/opam/num.1.4/opam
A esy.lock/opam/ocaml-compiler-libs.v0.12.4/opam
A esy.lock/opam/ocaml-lsp-server.1.13.1/opam
A esy.lock/opam/ocaml-syntax-shims.1.0.0/opam
A esy.lock/opam/ocaml-version.3.5.0/opam
A esy.lock/opam/ocaml_intrinsics.v0.15.2/opam
A esy.lock/opam/ocamlbuild.0.14.1/opam
A esy.lock/opam/ocamlfind.1.9.5/files/0001-Fix-bug-when-installing-with-a-system-compiler.patch
A esy.lock/opam/ocamlfind.1.9.5/opam
A esy.lock/opam/ocamlformat-rpc-lib.0.24.1/opam
A esy.lock/opam/ocamlformat.0.24.1/opam
A esy.lock/opam/ocp-indent.1.8.1/opam
A esy.lock/opam/ocplib-endian.1.2/opam
A esy.lock/opam/octavius.1.2.2/opam
A esy.lock/opam/odoc-parser.2.0.0/opam
A esy.lock/opam/omd.1.3.2/opam
A esy.lock/opam/ordering.3.4.1/opam
A esy.lock/opam/ounit.2.2.6/opam
A esy.lock/opam/ounit2.2.2.6/opam
A esy.lock/opam/parsexp.v0.15.0/opam
A esy.lock/opam/pp.1.1.2/opam
A esy.lock/opam/ppx_assert.v0.15.0/opam
A esy.lock/opam/ppx_base.v0.15.0/opam
A esy.lock/opam/ppx_bench.v0.15.0/opam
A esy.lock/opam/ppx_bin_prot.v0.15.0/opam
A esy.lock/opam/ppx_cold.v0.15.0/opam
A esy.lock/opam/ppx_compare.v0.15.0/opam
A esy.lock/opam/ppx_custom_printf.v0.15.0/opam
A esy.lock/opam/ppx_derivers.1.2.1/opam
A esy.lock/opam/ppx_disable_unused_warnings.v0.15.0/opam
A esy.lock/opam/ppx_enumerate.v0.15.0/opam
A esy.lock/opam/ppx_expect.v0.15.0/opam
A esy.lock/opam/ppx_fields_conv.v0.15.0/opam
A esy.lock/opam/ppx_fixed_literal.v0.15.0/opam
A esy.lock/opam/ppx_hash.v0.15.0/opam
A esy.lock/opam/ppx_here.v0.15.0/opam
A esy.lock/opam/ppx_ignore_instrumentation.v0.15.0/opam
A esy.lock/opam/ppx_inline_test.v0.15.0/opam
A esy.lock/opam/ppx_jane.v0.15.0/opam
A esy.lock/opam/ppx_let.v0.15.0/opam
A esy.lock/opam/ppx_log.v0.15.0/opam
A esy.lock/opam/ppx_module_timer.v0.15.0/opam
A esy.lock/opam/ppx_optcomp.v0.15.0/opam
A esy.lock/opam/ppx_optional.v0.15.0/opam
A esy.lock/opam/ppx_pipebang.v0.15.0/opam
A esy.lock/opam/ppx_sexp_conv.v0.15.1/opam
A esy.lock/opam/ppx_sexp_message.v0.15.0/opam
A esy.lock/opam/ppx_sexp_value.v0.15.0/opam
A esy.lock/opam/ppx_stable.v0.15.0/opam
A esy.lock/opam/ppx_string.v0.15.0/opam
A esy.lock/opam/ppx_typerep_conv.v0.15.0/opam
A esy.lock/opam/ppx_variants_conv.v0.15.0/opam
A esy.lock/opam/ppx_yojson_conv_lib.v0.15.0/opam
A esy.lock/opam/ppxlib.0.27.0/opam
A esy.lock/opam/protocol_version_header.v0.15.0/opam
A esy.lock/opam/re.1.10.4/opam
A esy.lock/opam/result.1.5/opam
A esy.lock/opam/rresult.0.7.0/opam
A esy.lock/opam/seq.base/files/META.seq
A esy.lock/opam/seq.base/files/seq.install
A esy.lock/opam/seq.base/opam
A esy.lock/opam/sexp_pretty.v0.15.0/opam
A esy.lock/opam/sexplib.v0.15.1/opam
A esy.lock/opam/sexplib0.v0.15.1/opam
A esy.lock/opam/spawn.v0.15.1/opam
A esy.lock/opam/splittable_random.v0.15.0/opam
A esy.lock/opam/stdio.v0.15.0/opam
A esy.lock/opam/stdlib-shims.0.3.0/opam
A esy.lock/opam/stdune.3.4.1/opam
A esy.lock/opam/stringext.1.6.0/opam
A esy.lock/opam/textutils.v0.15.0/opam
A esy.lock/opam/textutils_kernel.v0.15.0/opam
A esy.lock/opam/time_now.v0.15.0/opam
A esy.lock/opam/timezone.v0.15.0/opam
A esy.lock/opam/topkg.1.0.5/opam
A esy.lock/opam/typerep.v0.15.0/opam
A esy.lock/opam/uri.4.2.0/opam
A esy.lock/opam/uucp.14.0.0/opam
A esy.lock/opam/uuseg.14.0.0/opam
A esy.lock/opam/uutf.1.0.3/opam
A esy.lock/opam/variantslib.v0.15.0/opam
A esy.lock/opam/xdg.3.4.1/opam
A esy.lock/opam/xmlm.1.4.0/opam
A esy.lock/opam/yojson.2.0.2/opam
A esy.lock/overrides/opam__s__camlzip_opam__c__1.11_opam_override/package.json
A esy.lock/overrides/opam__s__conf_m4_opam__c__1_opam_override/package.json
A esy.lock/overrides/opam__s__conf_pkg_config_opam__c__2_opam_override/package.json
A esy.lock/overrides/opam__s__conf_zlib_opam__c__1_opam_override/package.json
A esy.lock/overrides/opam__s__num_opam__c__1.4_opam_override/files/num-1.4.patch
A esy.lock/overrides/opam__s__num_opam__c__1.4_opam_override/package.json
A esy.lock/overrides/opam__s__ocamlbuild_opam__c__0.14.1_opam_override/files/winpatch.patch
A esy.lock/overrides/opam__s__ocamlbuild_opam__c__0.14.1_opam_override/package.json
A esy.lock/overrides/opam__s__ocamlfind_opam__c__1.9.5_opam_override/files/findlib.patch
A esy.lock/overrides/opam__s__ocamlfind_opam__c__1.9.5_opam_override/package.json

Log Message:
-----------
Add lock file


Commit: f3d5feef07881fc97c4cd92793116ce63e88addd
https://github.com/biocaml/biocaml/commit/f3d5feef07881fc97c4cd92793116ce63e88addd
Author: Richard Davison <rn...@solvuu.com>
Date: 2022-08-30 (Tue, 30 Aug 2022)

Changed paths:
A .ocamlformat
M app/biocaml_run_benchmarks.ml
M app/biocaml_run_tests.ml
M app/dune
M dune-project
M lib/async/dune
M lib/async/fastq.ml
M lib/async/future_async.ml
M lib/async/future_async.mli
M lib/async/lines.ml
M lib/async/sam.ml
M lib/base/bed.ml
M lib/base/bed.mli
M lib/base/dune
M lib/base/fasta.ml
M lib/base/fasta.mli
M lib/base/gff.ml
M lib/base/gff.mli
M lib/base/line.ml
M lib/base/line.mli
M lib/base/lines.ml
M lib/base/lines.mli
M lib/base/macs2.ml
M lib/base/macs2.mli
M lib/base/table.ml
M lib/base/ucsc_genome_browser.ml
M lib/base/ucsc_genome_browser.mli
M lib/benchmark/line_split.ml
M lib/ez/bam.ml
M lib/ez/dune
M lib/ez/fasta.ml
M lib/ez/fastq.ml
M lib/ez/lines.ml
M lib/ez/lines.mli
M lib/ez/phred_score.ml
M lib/ez/range.ml
M lib/ez/roman_num.ml
M lib/ez/sam.ml
M lib/ez/seq_range.ml
M lib/ez/strand.ml
M lib/lwt/dune
M lib/lwt/fastq.ml
M lib/lwt/future_lwt.ml
M lib/lwt/future_lwt.mli
M lib/lwt/lines.ml
M lib/lwt/sam.ml
M lib/test/bam.ml
M lib/test/bed.ml
M lib/test/bgzf.ml
M lib/test/bin_pred.ml
M lib/test/biocaml_test_zip.ml
M lib/test/dune
M lib/test/fasta.ml
M lib/test/gff.ml
M lib/test/interval_tree.ml
M lib/test/line.ml
M lib/test/lines.ml
M lib/test/phred_score.ml
M lib/test/pwm.ml
M lib/test/rSet.ml
M lib/test/roman_num.ml
M lib/test/sam.ml
M lib/test/suite.ml
M lib/test/table.ml
M lib/test/track.ml
M lib/test/ucsc_genome_browser.ml
M lib/test/utils.ml
M lib/test/vcf.ml
M lib/test/wig.ml
M lib/unix/accu.ml
M lib/unix/accu.mli
M lib/unix/bam.ml
M lib/unix/bam.mli
M lib/unix/bamstats.ml
M lib/unix/bamstats.mli
M lib/unix/bar.ml
M lib/unix/bar.mli
M lib/unix/bed.ml
M lib/unix/bed.mli
M lib/unix/bgzf.ml
M lib/unix/bgzf.mli
M lib/unix/bin_pred.ml
M lib/unix/bin_pred.mli
M lib/unix/biocaml_result.ml
M lib/unix/biocaml_result.mli
M lib/unix/bpmap.ml
M lib/unix/bpmap.mli
M lib/unix/cel.ml
M lib/unix/cel.mli
M lib/unix/chr.ml
M lib/unix/chr.mli
M lib/unix/dune
M lib/unix/entrez.ml
M lib/unix/entrez.mli
M lib/unix/fasta.ml
M lib/unix/fasta.mli
M lib/unix/fastq.ml
M lib/unix/fastq.mli
M lib/unix/file_mapper.ml
M lib/unix/file_mapper.mli
M lib/unix/future.ml
M lib/unix/future_unix.ml
M lib/unix/future_unix.mli
M lib/unix/genomeMap.ml
M lib/unix/genomeMap.mli
M lib/unix/gff.ml
M lib/unix/gff.mli
M lib/unix/histogram.ml
M lib/unix/histogram.mli
M lib/unix/interval_tree.ml
M lib/unix/interval_tree.mli
M lib/unix/iset.ml
M lib/unix/iset.mli
M lib/unix/jaspar.ml
M lib/unix/jaspar.mli
M lib/unix/lines.ml
M lib/unix/lines.mli
M lib/unix/math.ml
M lib/unix/math.mli
M lib/unix/msg.ml
M lib/unix/msg.mli
M lib/unix/mzData.ml
M lib/unix/mzData.mli
M lib/unix/phred_score.ml
M lib/unix/phred_score.mli
M lib/unix/pos.ml
M lib/unix/pos.mli
M lib/unix/psl.ml
M lib/unix/psl.mli
M lib/unix/pwm.ml
M lib/unix/pwm.mli
M lib/unix/rSet.ml
M lib/unix/rSet.mli
M lib/unix/range.ml
M lib/unix/range.mli
M lib/unix/roman_num.ml
M lib/unix/roman_num.mli
M lib/unix/sam.ml
M lib/unix/sam.mli
M lib/unix/sbml.ml
M lib/unix/sbml.mli
M lib/unix/seq.ml
M lib/unix/seq.mli
M lib/unix/seq_range.ml
M lib/unix/seq_range.mli
M lib/unix/sgr.ml
M lib/unix/sgr.mli
M lib/unix/solexa_score.ml
M lib/unix/solexa_score.mli
M lib/unix/strand.ml
M lib/unix/strand.mli
M lib/unix/table.ml
M lib/unix/table.mli
M lib/unix/tfxm.ml
M lib/unix/tfxm.mli
M lib/unix/track.ml
M lib/unix/track.mli
M lib/unix/transcripts.ml
M lib/unix/transcripts.mli
M lib/unix/vcf.ml
M lib/unix/vcf.mli
M lib/unix/wig.ml
M lib/unix/wig.mli
M lib/unix/zip.ml
M lib/unix/zip.mli
M src/app/biocaml_app_common.ml
M src/app/biocaml_app_entrez.ml
M src/benchmarks/bam_sam_and_the_gc.ml
M src/benchmarks/benchmark_zip.ml
M src/doc/biocaml.css
M src/odoc/biohtml.ml
M src/tmp/biocaml_app_bed_operations.ml
M src/tmp/biocaml_app_count_alignments.ml
M src/tmp/biocaml_app_demux.ml
M src/tmp/biocaml_app_main.ml
M src/tmp/biocaml_app_random.ml
M src/tmp/biocaml_app_transform.ml
M src/tmp/biocaml_fasta.ml
M src/tmp/biocaml_fasta.mli
M src/tmp/biocaml_tags.ml
M src/tmp/biocaml_tags.mli
M src/tmp/test_fasta.ml
M src/top/biocaml_toplevel.ml

Log Message:
-----------
Formatting


Compare: https://github.com/biocaml/biocaml/compare/b5f164db11cb...f3d5feef0788

[Ashish Agarwal]

Branch: refs/heads/master

Commit: 023734b5ddcb6734b6607adf28e757ca8f126309
https://github.com/biocaml/biocaml/commit/023734b5ddcb6734b6607adf28e757ca8f126309
Author: Ashish Agarwal <ash...@solvuu.com>
Date: 2022-08-31 (Wed, 31 Aug 2022)

Changed paths:
R .vscode/extensions.json
R .vscode/settings.json

Log Message:
-----------
Delete .vscode directory


Commit: 0d40905bd4dc32cc5f9927001aa6c23c36430007
https://github.com/biocaml/biocaml/commit/0d40905bd4dc32cc5f9927001aa6c23c36430007
Author: Ashish Agarwal <ash...@solvuu.com>
Date: 2022-08-31 (Wed, 31 Aug 2022)

Changed paths:
R .nvmrc

Log Message:
-----------
Delete .nvmrc


Commit: d9c9891dcba8f350c9ae42ca0351c15b43b7c4ec
https://github.com/biocaml/biocaml/commit/d9c9891dcba8f350c9ae42ca0351c15b43b7c4ec
Author: Ashish Agarwal <ash...@solvuu.com>
Date: 2022-08-31 (Wed, 31 Aug 2022)

Changed paths:
M Makefile

Log Message:
-----------
Don't assume esy is being used


Commit: c330d88b17b8cc87a53d6785e8a62379322b7d2e
https://github.com/biocaml/biocaml/commit/c330d88b17b8cc87a53d6785e8a62379322b7d2e
Author: Ashish Agarwal <ash...@solvuu.com>
Date: 2022-08-31 (Wed, 31 Aug 2022)

Changed paths:
M .gitignore

Log Message:
-----------

Stop ignoring directories that shouldn't exist


Commit: 71b08f5d53ee880f53208d51faa73160f08810b1
https://github.com/biocaml/biocaml/commit/71b08f5d53ee880f53208d51faa73160f08810b1
Author: Ashish Agarwal <ash...@solvuu.com>
Date: 2022-08-31 (Wed, 31 Aug 2022)

Changed paths:
R esy.lock/.gitattributes
R esy.lock/.gitignore
R esy.lock/index.json
R esy.lock/opam/angstrom.0.15.0/opam
R esy.lock/opam/astring.0.8.5/opam
R esy.lock/opam/async.v0.15.0/opam
R esy.lock/opam/async_kernel.v0.15.0/opam
R esy.lock/opam/async_rpc_kernel.v0.15.0/opam
R esy.lock/opam/async_unix.v0.15.0/opam
R esy.lock/opam/base-bigarray.base/opam
R esy.lock/opam/base-bytes.base/opam
R esy.lock/opam/base-threads.base/opam
R esy.lock/opam/base-unix.base/opam
R esy.lock/opam/base.v0.15.0/opam
R esy.lock/opam/base64.3.5.0/opam
R esy.lock/opam/base_bigstring.v0.15.0/opam
R esy.lock/opam/base_quickcheck.v0.15.0/opam
R esy.lock/opam/bigstringaf.0.9.0/opam
R esy.lock/opam/bin_prot.v0.15.0/opam
R esy.lock/opam/camlp-streams.5.0.1/opam
R esy.lock/opam/camlzip.1.11/opam
R esy.lock/opam/cfstream.1.3.1/opam
R esy.lock/opam/chrome-trace.3.4.1/opam
R esy.lock/opam/cmdliner.1.1.1/opam
R esy.lock/opam/conf-m4.1/opam
R esy.lock/opam/conf-pkg-config.2/opam
R esy.lock/opam/conf-zlib.1/opam
R esy.lock/opam/core.v0.15.0/opam
R esy.lock/opam/core_kernel.v0.15.0/opam
R esy.lock/opam/core_unix.v0.15.0/opam
R esy.lock/opam/cppo.1.6.9/opam
R esy.lock/opam/csexp.1.5.1/opam
R esy.lock/opam/dune-build-info.3.4.1/opam
R esy.lock/opam/dune-configurator.3.4.1/opam
R esy.lock/opam/dune-rpc.3.4.1/opam
R esy.lock/opam/dune.3.4.1/opam
R esy.lock/opam/dyn.3.4.1/opam
R esy.lock/opam/either.1.0.0/opam
R esy.lock/opam/expect_test_helpers_core.v0.15.0/opam
R esy.lock/opam/fiber.3.4.1/opam
R esy.lock/opam/fieldslib.v0.15.0/opam
R esy.lock/opam/fix.20220121/opam
R esy.lock/opam/fpath.0.7.3/opam
R esy.lock/opam/int_repr.v0.15.0/opam
R esy.lock/opam/jane-street-headers.v0.15.0/opam
R esy.lock/opam/jst-config.v0.15.1/opam
R esy.lock/opam/lwt.5.6.1/opam
R esy.lock/opam/menhir.20220210/opam
R esy.lock/opam/menhirLib.20220210/opam
R esy.lock/opam/menhirSdk.20220210/opam
R esy.lock/opam/num.1.4/opam
R esy.lock/opam/ocaml-compiler-libs.v0.12.4/opam
R esy.lock/opam/ocaml-lsp-server.1.13.1/opam
R esy.lock/opam/ocaml-syntax-shims.1.0.0/opam
R esy.lock/opam/ocaml-version.3.5.0/opam
R esy.lock/opam/ocaml_intrinsics.v0.15.2/opam
R esy.lock/opam/ocamlbuild.0.14.1/opam
R esy.lock/opam/ocamlfind.1.9.5/files/0001-Fix-bug-when-installing-with-a-system-compiler.patch
R esy.lock/opam/ocamlfind.1.9.5/opam
R esy.lock/opam/ocamlformat-rpc-lib.0.24.1/opam
R esy.lock/opam/ocamlformat.0.24.1/opam
R esy.lock/opam/ocp-indent.1.8.1/opam
R esy.lock/opam/ocplib-endian.1.2/opam
R esy.lock/opam/octavius.1.2.2/opam
R esy.lock/opam/odoc-parser.2.0.0/opam
R esy.lock/opam/omd.1.3.2/opam
R esy.lock/opam/ordering.3.4.1/opam
R esy.lock/opam/ounit.2.2.6/opam
R esy.lock/opam/ounit2.2.2.6/opam
R esy.lock/opam/parsexp.v0.15.0/opam
R esy.lock/opam/pp.1.1.2/opam
R esy.lock/opam/ppx_assert.v0.15.0/opam
R esy.lock/opam/ppx_base.v0.15.0/opam
R esy.lock/opam/ppx_bench.v0.15.0/opam
R esy.lock/opam/ppx_bin_prot.v0.15.0/opam
R esy.lock/opam/ppx_cold.v0.15.0/opam
R esy.lock/opam/ppx_compare.v0.15.0/opam
R esy.lock/opam/ppx_custom_printf.v0.15.0/opam
R esy.lock/opam/ppx_derivers.1.2.1/opam
R esy.lock/opam/ppx_disable_unused_warnings.v0.15.0/opam
R esy.lock/opam/ppx_enumerate.v0.15.0/opam
R esy.lock/opam/ppx_expect.v0.15.0/opam
R esy.lock/opam/ppx_fields_conv.v0.15.0/opam
R esy.lock/opam/ppx_fixed_literal.v0.15.0/opam
R esy.lock/opam/ppx_hash.v0.15.0/opam
R esy.lock/opam/ppx_here.v0.15.0/opam
R esy.lock/opam/ppx_ignore_instrumentation.v0.15.0/opam
R esy.lock/opam/ppx_inline_test.v0.15.0/opam
R esy.lock/opam/ppx_jane.v0.15.0/opam
R esy.lock/opam/ppx_let.v0.15.0/opam
R esy.lock/opam/ppx_log.v0.15.0/opam
R esy.lock/opam/ppx_module_timer.v0.15.0/opam
R esy.lock/opam/ppx_optcomp.v0.15.0/opam
R esy.lock/opam/ppx_optional.v0.15.0/opam
R esy.lock/opam/ppx_pipebang.v0.15.0/opam
R esy.lock/opam/ppx_sexp_conv.v0.15.1/opam
R esy.lock/opam/ppx_sexp_message.v0.15.0/opam
R esy.lock/opam/ppx_sexp_value.v0.15.0/opam
R esy.lock/opam/ppx_stable.v0.15.0/opam
R esy.lock/opam/ppx_string.v0.15.0/opam
R esy.lock/opam/ppx_typerep_conv.v0.15.0/opam
R esy.lock/opam/ppx_variants_conv.v0.15.0/opam
R esy.lock/opam/ppx_yojson_conv_lib.v0.15.0/opam
R esy.lock/opam/ppxlib.0.27.0/opam
R esy.lock/opam/protocol_version_header.v0.15.0/opam
R esy.lock/opam/re.1.10.4/opam
R esy.lock/opam/result.1.5/opam
R esy.lock/opam/rresult.0.7.0/opam
R esy.lock/opam/seq.base/files/META.seq
R esy.lock/opam/seq.base/files/seq.install
R esy.lock/opam/seq.base/opam
R esy.lock/opam/sexp_pretty.v0.15.0/opam
R esy.lock/opam/sexplib.v0.15.1/opam
R esy.lock/opam/sexplib0.v0.15.1/opam
R esy.lock/opam/spawn.v0.15.1/opam
R esy.lock/opam/splittable_random.v0.15.0/opam
R esy.lock/opam/stdio.v0.15.0/opam
R esy.lock/opam/stdlib-shims.0.3.0/opam
R esy.lock/opam/stdune.3.4.1/opam
R esy.lock/opam/stringext.1.6.0/opam
R esy.lock/opam/textutils.v0.15.0/opam
R esy.lock/opam/textutils_kernel.v0.15.0/opam
R esy.lock/opam/time_now.v0.15.0/opam
R esy.lock/opam/timezone.v0.15.0/opam
R esy.lock/opam/topkg.1.0.5/opam
R esy.lock/opam/typerep.v0.15.0/opam
R esy.lock/opam/uri.4.2.0/opam
R esy.lock/opam/uucp.14.0.0/opam
R esy.lock/opam/uuseg.14.0.0/opam
R esy.lock/opam/uutf.1.0.3/opam
R esy.lock/opam/variantslib.v0.15.0/opam
R esy.lock/opam/xdg.3.4.1/opam
R esy.lock/opam/xmlm.1.4.0/opam
R esy.lock/opam/yojson.2.0.2/opam
R esy.lock/overrides/opam__s__camlzip_opam__c__1.11_opam_override/package.json
R esy.lock/overrides/opam__s__conf_m4_opam__c__1_opam_override/package.json
R esy.lock/overrides/opam__s__conf_pkg_config_opam__c__2_opam_override/package.json
R esy.lock/overrides/opam__s__conf_zlib_opam__c__1_opam_override/package.json
R esy.lock/overrides/opam__s__num_opam__c__1.4_opam_override/files/num-1.4.patch
R esy.lock/overrides/opam__s__num_opam__c__1.4_opam_override/package.json
R esy.lock/overrides/opam__s__ocamlbuild_opam__c__0.14.1_opam_override/files/winpatch.patch
R esy.lock/overrides/opam__s__ocamlbuild_opam__c__0.14.1_opam_override/package.json
R esy.lock/overrides/opam__s__ocamlfind_opam__c__1.9.5_opam_override/files/findlib.patch
R esy.lock/overrides/opam__s__ocamlfind_opam__c__1.9.5_opam_override/package.json
R package.json

Log Message:
-----------
Delete esy configuration


Commit: ac619539fed348747d686b8f628e80c1bb8bfc59
https://github.com/biocaml/biocaml/commit/ac619539fed348747d686b8f628e80c1bb8bfc59
Author: Ashish Agarwal <ash...@solvuu.com>
Date: 2022-08-31 (Wed, 31 Aug 2022)

Changed paths:
M .gitignore
A .ocamlformat
M Makefile

Merge pull request #181 from biocaml/modernize

Format code and update Makefile


Compare: https://github.com/biocaml/biocaml/compare/5ea369b07960...ac619539fed3